| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1381 |
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| Symbol | |
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| ID | 3229350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 1246384 |
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| End bp | 1248762 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637120943 |
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| Product | GGDEF domain/HD domain-containing protein |
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| Protein accession | YP_182092 |
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| Protein GI | 57233885 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCATC TGGACGCCCC GCCGGAACAA ACCCTGTTCT GGCACAACCT GCTAAATATT
GCTCTCTTTA CCGCCATACT TATGTATTAC CAGTTTATCC ATGTCTATAC CAACCGTAAA
AACAACCTTT TCCTGATAAT AGGTTATATT ACACTGGCCC TGGATATTTT CTTCAATCTG
AACGGACAGC TGGTTACCTC TGCTTATATA GAGGACAATA TCGTTTACCA CACCACTACT
CCATTATTTT ATTATATTTT TACATTTGCC CTGCTGTTCA TAGGGGTTAT CATTTATCAT
CTGGTACACA AATACCGCCA ATCTACAGAC CCGGCCGAAC GCAACCGCAC CCTGTACCTG
GTACTGGGGT GGGTAATTGT AGTTCTTTCA AGCTATACCA ATCTTAGTGA CAACCCCCGC
ATCTACGGCC TGCCCCTTGA CCATGTGGGC AACTTTATAA ACGCGGGAAT TATTGTCTAC
GCCATAACCC AGTACCGCCT GATAGACATT AAACTGATAG CCCGCAAGAC CCTTACCTAT
GTTCTTTTGT TTTTCTCCAT GATAACCATA TATGCAGGCG CTTTATTTGT AGCTACACGT
ATATTCCCCG CCGAAGAAAT GTCTACTATA ATCCTTATGG CAACCCTGAT TGTGCTGATA
CTGGCCATGA CCGCCCGCCC TCTAAGAACA CTTATTGAAA AACGCATAGA CAGGTTATTT
TATCAGGAGA CCTATGAATC CCGTCTAGCG CTTATGGGTT TTTCACGCAA GATGGGTAAC
ATACTTAATC TGGAGGAACT GGCCAAATCA CTGCTACCTG ACCTGGCTAA ATCTTTAAAT
GTAAACAAAA CCGCCCTCCT TTTCCCGGAT GCTGCCAGCG GTGAGTTTTC CCTGCAATAT
GTTTACCCCG GTGATGACCA GCTGAAAACC CATTTCAAAC TGGCTTCCGA TAACCCTGTC
ATTGCCTGGC TGGATAAGAA CAATGCCCAG TTATACCTGA ATAAACTGGA TACTTTACCG
GAACTGAAGG GCTTATGGCA GATAGAGAAA GAGCAGCTCC AGAAATCAGA GATGGGGTTA
CTCTATCCCA TAAAAAGCCG TGATAAGCTG ATAGGCATTA TCGGGCTGGG CAACAAAAAA
CGGGGGGGCA TATATTCCAC CGGAGATTTG GACCTGCTGA TAAGTGTAGC CAATCAGGCC
GGTATTATAA TAGAAAATGC CCAGCTTTAT ACTCAGGCCA CTATCCGTGC CAATACCGAC
GAACTTACCC GCCTGTATAA TCACCGCCAC TTTCATGAGC GCATAGAACA GGAAATAGCC
CGTGGTTCAC GCTTCGGCAA TACCTTTTCC CTGATACTGC TTGACCTTGA CCTCTTTAAG
GTCTACAACG ACGTATACGG CCATCTGGCA GGTGACCAAC TGCTCCGCAG GCTGGGTAAA
ATACTGGAAA ATTCCATCCG CTCTATTGAT ATGGCCTTCC GCTACGGAGG CGAGGAATTT
GCCATAATGC TGCCCGGCAC TAAGATTGAA GATGCTTATC ATGTAGCCGA ACGTATCCGC
AAAAATGTTG AGACCAAGTC TTCCTTCCGT GATATGCCCA TAACCGCTTC CCTGGGTCTG
GCTAACTGGC CGAATGACGG GATAATGAAG GAAGAGATTA TAGCCAAAGC TGATGCCGCC
CTGTACCACT CCAAAGAGAC AGGACGAAAC CGTACCAGTC TGCCTGCCGA GTTGAATAGC
AACCCCACCC AGGTAATCAA CTCCGAGCTG GAGGCCCGTC CCAAGGCTAT GTCCATTATT
TATGCTTTAG CGGCCACGGT TGATGCCAAG GACCATTATA CTTACGGGCA TTCGCGCAAG
GTAAGTGAAT ATGCAGTAGC CCTGGCAGAA ATATTAAAAC TGCCTGAGGA AAAAGTGGAA
AACATACGGG CGGCCGGACT GCTGCATGAT ATAGGCAAAA TAGGCGTACC CGACCATATT
CTGACCAAGC CATCTGCTTT GGACGATGAA GAATGGGAGC CTATTAAAAC CCACCCGGAA
CTGGGGGTGG AAATACTGAA GCGGATAATT GACCTGGTAA ACTGCCTGCC GGCAATACTC
CATCACCATG AACACTTTGA CGGCAGCGGA TACCCGTTTG GGCTTAAGGG CGAAAACATA
CCTCTGGAAG CCAGAATACT CAGTATTGCA GATGCCTATG ATGCGGTTAC CTCACCCCGC
CCCTACCGCA CCCAACTCCA TACCGAGCAG GCTATAGCCG AACTGAAACG CTGTGCCGGC
TCCCAGTTTG ACCCGGCGCT GGTAGATATC TTCTGCCGTG TTATAAAACC GGAAGATAAC
CCCCAACTCG AAGCCTCACC GGAAACCGGC ACTGACTAA
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| Protein sequence | MLHLDAPPEQ TLFWHNLLNI ALFTAILMYY QFIHVYTNRK NNLFLIIGYI TLALDIFFNL
NGQLVTSAYI EDNIVYHTTT PLFYYIFTFA LLFIGVIIYH LVHKYRQSTD PAERNRTLYL
VLGWVIVVLS SYTNLSDNPR IYGLPLDHVG NFINAGIIVY AITQYRLIDI KLIARKTLTY
VLLFFSMITI YAGALFVATR IFPAEEMSTI ILMATLIVLI LAMTARPLRT LIEKRIDRLF
YQETYESRLA LMGFSRKMGN ILNLEELAKS LLPDLAKSLN VNKTALLFPD AASGEFSLQY
VYPGDDQLKT HFKLASDNPV IAWLDKNNAQ LYLNKLDTLP ELKGLWQIEK EQLQKSEMGL
LYPIKSRDKL IGIIGLGNKK RGGIYSTGDL DLLISVANQA GIIIENAQLY TQATIRANTD
ELTRLYNHRH FHERIEQEIA RGSRFGNTFS LILLDLDLFK VYNDVYGHLA GDQLLRRLGK
ILENSIRSID MAFRYGGEEF AIMLPGTKIE DAYHVAERIR KNVETKSSFR DMPITASLGL
ANWPNDGIMK EEIIAKADAA LYHSKETGRN RTSLPAELNS NPTQVINSEL EARPKAMSII
YALAATVDAK DHYTYGHSRK VSEYAVALAE ILKLPEEKVE NIRAAGLLHD IGKIGVPDHI
LTKPSALDDE EWEPIKTHPE LGVEILKRII DLVNCLPAIL HHHEHFDGSG YPFGLKGENI
PLEARILSIA DAYDAVTSPR PYRTQLHTEQ AIAELKRCAG SQFDPALVDI FCRVIKPEDN
PQLEASPETG TD
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