Gene DET1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1375 
Symbol 
ID3229324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp1241981 
End bp1242883 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content52% 
IMG OID637120937 
Productribosomal large subunit pseudouridine synthase D 
Protein accessionYP_182086 
Protein GI57233860 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000447138 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAACGC GTAAACTGGT TGCCGAATCT GACGGTGAGC GGCTGGATAA ATACATAACC 
CAAAAGGAAA CTGACCTTTC CCGCAGTTTT ATACAGGAAC TGGTGGAAGC AGGCCATATA
CAGGTAAACG GGAAAAACGC CAAACCCAGT CTGAAACTTA AAAACGGTGA CACTATAACT
ATAGAAATAC CCCCCGAAAC CCCGCCCGAA CTCAAAGCCG AAGATATACC CCTGGAGATA
ATCTTCCAGG ACAAGGACCT GCTGCTTATA AATAAACCGC CAGGGCTGAC CGTTCACCCT
GCCCCGGGTC ACCCTGACCA TACCCTGATA AACGGGGTGC TGGCACTTGA ACCTGAAATG
GAAGACTTTG ACGACCCCCT TCGTCCCGGA ATAGTCCACC GTCTGGATAA AGATACTTCC
GGGCTGCTGC TGGTAGCTAA AAACCGCGAA GCCCTGGCGA ACCTGTCTGC CCAGTTTAAA
GAACGGACCG TACGTAAGTA CTATCTGACC TTGGTGCAAG GGGAACTGCA TCCTGCGGAA
GGGTTTATTG AAGCCCCGCT GGGGCGTGAC CCTCAAAACC GCCAGAAAAT TGCGGTGGTA
TCTAACGGAA GGCCCGCCCG CACCGGCTAC AAAGTGCTGC GTTATATTCA GGGATACAGC
CTGCTTGAAG TCAAACTTGA AACCGGCCGC ACTCACCAGA TACGTGTCCA TTTTGCGGCT
ATAGGCCACC CGGTGGCAGG TGATGCGGTT TACGGGCAGA AAGAGACTTG GCTTAAAAGA
CAGTTTTTGC ATGCCCACCG CCTTAGTTTC AGCCTGCCCT CAAACGGGCA GAACGTAGAG
TTCAGCTCTC CCCTTCCGCC GGATTTGGAA GAGGCCTTGA AAACACTGGA AAACCCCTCC
TGA
 
Protein sequence
MKTRKLVAES DGERLDKYIT QKETDLSRSF IQELVEAGHI QVNGKNAKPS LKLKNGDTIT 
IEIPPETPPE LKAEDIPLEI IFQDKDLLLI NKPPGLTVHP APGHPDHTLI NGVLALEPEM
EDFDDPLRPG IVHRLDKDTS GLLLVAKNRE ALANLSAQFK ERTVRKYYLT LVQGELHPAE
GFIEAPLGRD PQNRQKIAVV SNGRPARTGY KVLRYIQGYS LLEVKLETGR THQIRVHFAA
IGHPVAGDAV YGQKETWLKR QFLHAHRLSF SLPSNGQNVE FSSPLPPDLE EALKTLENPS