| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1352 |
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| Symbol | |
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| ID | 3229370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 1222968 |
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| End bp | 1224173 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637120914 |
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| Product | pilin biogenesis protein, putative |
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| Protein accession | YP_182063 |
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| Protein GI | 57233905 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.291747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTTA ATTACGTAGC TTACGGTCAG GACAAAAGGC TTGTAAAAGG GAAAATCCCG
GCGACCTCTC TGGAGGCAGC CCAGAGGCTG CTGAGCCACA GCGGTTACCA GATTTTAAGC
ATAAAACCCA TTACGCCTTT TTTCAGCACC AGCGGTTCAT TTAACTTCTC CAAGGTAAAA
CCCAGAGAAG TTATTCTGTT TTCCCGCCAG CTGGCTCTGC TGCTTGAATC CGGTACGGAT
ATTGTCACTT CACTGGAACT GCTCCAGGAA CAGACAACCA ATAAACTTTT CCGTGAGATT
ATAGGCGAGA TTGTAAATGA TATCCGGGGA GGCAGTTCGC TCTCTCTGGC TATGAGCAAA
CACCCCAAGG CTTTCCCGCC CCTGTATCAC CGGGTAATTG CCGCCGGCGA ACAGGGAGGC
AGCCTGGAAG TAGTACTGCG TAATCTGGCT AACTTTGTCC AGCGGAACGT GGAAACTGAA
AAGAAGATAA AGAGCGCCCT GACTTACCCC AGCGTAGTGG CGGTGGTAGG TATTCTGGTG
CTGCTGCTCA TGGTAACCTT CGTATTACCG GCCTTCACCA GTTTATACTC CCAAATGGGC
ACTGAACTGC CCGCCGCCAC CAGAATACTC ATTGGCATAA GTGATTTTTT TGGGGCTTGG
GGTTTGTATG TAACCGGCAT TTTTATAGCA ACCATAGCCG GGTTGGTAAT ATATCTGCGC
ACACCCGCAG GACGCTACCA GAGAGACCGG ATAGCCCTGA AACTGCCTAT AATCGGGCGG
ATTCTGCTCC TTTCAGAACT TTCCCGTGCC TGCCAGACTA TGTCACTGCT GTTTAAAGCC
GGTCTGCCCC TGCCCGAAAT CATGAATCAA ACCACTGCCG CAGCCAACAA TAAACTTATC
AGCAACGCCC TGGCAGAGGT TCAGCATGAC CTGATAAGGG GTGAAGGGCT TTCCCGCCCC
ATGACCAAAA ACCCCCTCTT CCTGCCCATG ATGGTTCAGA TGGTAAGCGT GGGTGAAGAA
ACCGGTAAAC TTGATGATAC CCTTGCTACT GTATCAGCTA CTTATGATAC CGAAGCTGAC
GACCGCATAA GTTCCGCCAT AGGCATGATA CAGCCGGTTA TGACCATAGC TATAGGCTTG
ATAGTAGGCT TTATTGCCGT TGCCCTGGTG TCTTCCATGT ACTCTTTGTA CGGGCAGATT
GGCTAA
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| Protein sequence | MDFNYVAYGQ DKRLVKGKIP ATSLEAAQRL LSHSGYQILS IKPITPFFST SGSFNFSKVK
PREVILFSRQ LALLLESGTD IVTSLELLQE QTTNKLFREI IGEIVNDIRG GSSLSLAMSK
HPKAFPPLYH RVIAAGEQGG SLEVVLRNLA NFVQRNVETE KKIKSALTYP SVVAVVGILV
LLLMVTFVLP AFTSLYSQMG TELPAATRIL IGISDFFGAW GLYVTGIFIA TIAGLVIYLR
TPAGRYQRDR IALKLPIIGR ILLLSELSRA CQTMSLLFKA GLPLPEIMNQ TTAAANNKLI
SNALAEVQHD LIRGEGLSRP MTKNPLFLPM MVQMVSVGEE TGKLDDTLAT VSATYDTEAD
DRISSAIGMI QPVMTIAIGL IVGFIAVALV SSMYSLYGQI G
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