| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1345 |
|---|
| Symbol | |
|---|
| ID | 3229377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 1215887 |
|---|
| End bp | 1216897 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637120907 |
|---|
| Product | tagatose 1,6-diphosphate aldolase |
|---|
| Protein accession | YP_182056 |
|---|
| Protein GI | 57233912 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3684] Tagatose-1,6-bisphosphate aldolase |
|---|
| TIGRFAM ID | [TIGR01232] tagatose 1,6-diphosphate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTATCA GTGCCGGTAA ACTGCTTAAC CTGACTGCTC TGGCCAGCCA GAGAGGTTTA
TTTGAGATTG CGGCTATGGA CCACCGCGGC TCCATAAAAA AGCACCTCTG CCCGAAAACC
ACCGAAGAAG AATGCTACCG CAGCCTGGCT GATTTCAAAC TGAGCCTTTG CCGGGCTTTT
TCAGGGCAGG CCAGCGCCGT ACTCCTTGAC CCCATTTACG GGCTGCCTGA GTGCCTGGCC
CAAAACGCCA TTGCACCCGG CTGCGGCTTG CTTGTCAGCC TGGAATCAAG CGGTTACTGC
GGAGAGGCTG AGTACCGGAC TACCGAACTT CTTAAAAACT GGGGGGTAAA CAAGATAAAA
CTGCTGGGGG CAAACGCCGT CAAGCTGCTG CTTTATTACC GCCCGGATAT AAAAGATTTA
GCCAAGACCC AGCAGCTTCT GGTAAAAACC GTGGCTGACG AATGCCGCAA ACTGGATATC
CCCTTTGTGC TGGAGCCTGT TACCTACCCC ACCGGGCAGG AACTGAAAAA TGCCGGGCTT
TTTGCCAAAA ACAAACCGGG TTTAGTCCTT TCCACCGTAG AAGATTTGGC AGGACTGGGT
ATAGATATAC TCAAGGTGGA GTTTCCCGCC GACCTCCGCT TCAGCCTGAC CGAAGATGAG
GCCTTTATAT CCGCCCGAAA ACTGGACTCC ATCTGTCCCG TACCCTGGGC TATACTCTCT
GCCGGGGCGG ATTTTAACCT GTACGTGCGT GAACTGGAGA TAGCCTGCCA GTGCGGGGCA
TCCGGTTTTC TGGCCGGCAG AGCCGTCTGG CAGGAAGCTT TGGAGATAAC CAACCCGGTA
AACCGCCAGG ATTTTATAAA CCGCGTGGCC GCCGAAAGGT TTAAACGCCT GTGTCAGATA
GCCGAAAATA CGGGACGCCC CTGGCATGAA AAACTGGGAC TTAAAGCGGG TAATTTTATA
AACCCCAGCC CCACCTGGTA TGCCAACTAC CAGCCGGGAG AAAACCCATG A
|
|---|
| Protein sequence | MTISAGKLLN LTALASQRGL FEIAAMDHRG SIKKHLCPKT TEEECYRSLA DFKLSLCRAF
SGQASAVLLD PIYGLPECLA QNAIAPGCGL LVSLESSGYC GEAEYRTTEL LKNWGVNKIK
LLGANAVKLL LYYRPDIKDL AKTQQLLVKT VADECRKLDI PFVLEPVTYP TGQELKNAGL
FAKNKPGLVL STVEDLAGLG IDILKVEFPA DLRFSLTEDE AFISARKLDS ICPVPWAILS
AGADFNLYVR ELEIACQCGA SGFLAGRAVW QEALEITNPV NRQDFINRVA AERFKRLCQI
AENTGRPWHE KLGLKAGNFI NPSPTWYANY QPGENP
|
|---|
| |