| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1344 |
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| Symbol | ispH |
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| ID | 3229386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 1214948 |
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| End bp | 1215802 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637120906 |
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| Product | hydroxymethylbutenyl pyrophosphate reductase |
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| Protein accession | YP_182055 |
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| Protein GI | 57233921 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.257928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTGG AATGCGCATC TAATATCGGT TTTTGTTTTG GGGTACGGCG TGCCATAAAC
ATACTGGAGA AAACTGCCGC CGAAAAGGGT GGGGTGGAGA CGCTGGGGGC TTTGGTGCAT
AACCAGCAGG TCTTAAACCG CCTTTCGGGC ATGGGTGTCC GGGTAGTAAA AAATATAGAA
GACATTTCTG GCCGGACGGT AGCCATTTCC TCCCACGGGG TGGGGCCTTT AGTTTTAGAT
GAACTGAAAT CTAAGGGGCT GGAGGTAGTG GATACCACCT GTCCGTTTGT AAAAAGGGCT
CAGGTAGCTG CCAAACGCTT TCATGATGCC GGTTTTTTTA CCGTAATCTA CGGTGATGTA
AACCACCCGG AGGTTAAGGG CATTATGGGT TGGGCAGGCG GGGACGGGTT GGCTACCCTT
AATCCGCAGG GACTGGTTGA CGTGCCAGAT GTATCCCGTT ATATAGGGGT GCTTTCCCAA
ACCACCCAGA TACCCACCGG CTTCACCTCG TTTGTTAAAA ATGTGATAGA CCAGGCTCTG
GTGAAAGATG CTGAAATCCG TATAGCGGAT ACTCTCTGCC ACGATATCCG GGAGCGGCAG
ACAGCCGCTT TGGAACTGGC AGGCAGGGTA GACCTGATGC TGGTTATCGG CGGGCATAAC
AGCGCCAATA CCCGCCACCT GCTGGATTTG TGCAAGACCG TATCAAACAC CTATCTGATA
GAGACTGCTT CGGAACTGCA AACCGGATGG CTTAGGGGGG TAAACCGCAT CGGCATTACC
TCCGGGGCTT CCACTGACGA AACTACTATA TCCGAAGTTT GTTCGTATCT GGGCAGCCTT
TCAGCCGGAA CTTAG
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| Protein sequence | MKVECASNIG FCFGVRRAIN ILEKTAAEKG GVETLGALVH NQQVLNRLSG MGVRVVKNIE
DISGRTVAIS SHGVGPLVLD ELKSKGLEVV DTTCPFVKRA QVAAKRFHDA GFFTVIYGDV
NHPEVKGIMG WAGGDGLATL NPQGLVDVPD VSRYIGVLSQ TTQIPTGFTS FVKNVIDQAL
VKDAEIRIAD TLCHDIRERQ TAALELAGRV DLMLVIGGHN SANTRHLLDL CKTVSNTYLI
ETASELQTGW LRGVNRIGIT SGASTDETTI SEVCSYLGSL SAGT
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