Gene DET1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1343 
SymboltrpS 
ID3229387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp1213922 
End bp1214893 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content52% 
IMG OID637120905 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_182054 
Protein GI57233922 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.163691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGGG TTTTTTCCGG TGTCCGTCCC ACAGGCCGTC TCCATCTGGG CAACTACCTT 
GGAGCGGTTA AAAACTATGT GGCCTTGCAA GATGATTACG AATGTATTTA CTGCGTAGTA
GACATTCACG CCCTGACCAC TCTGGAAGAA ACGGATGCCT TAAAAGAAAA CATATATGAA
ATGATGCTGG ATTTGCTGGC ATCGGGTCTG GACCCCAAAA AGTGTATCCT GTTTGTTCAG
TCTCAGGTGC CGGAAATAAA CGAACTCTTT ACCCTGTTCG GCATGATTAC CCCTCTAAGC
TGGCTGCTTC GGGTGCCCAC CTTCAAGGAA AAGGTCAGGA TGCACCCTGA CAATGTTAAC
TATGGTCTGG TAGGCTATCC GGTGCTTCAG GCGGCAGATA TATCCCTTTA CAAGGCTGAC
TTAGTGCCGG TGGGGGTTGA CCAGCTGCCT CATCTGGAGC TTACCCGTGA GATAGTCCGC
CGGTTCAATG AAAAATTCGG GGATACTTTC CCTGAGGCGC AGGCACGCCT GACCAATTTT
CCCACGGTGG TTGGTCTGGA CGGCAAGGAC AAAATGAGCA AGTCGCTCAA CAATCATATT
GAGCTGGCTC TGTCAGAGGA AGAGACTGCC AAAAAAGTAA TGAGTGCGGT TACTGATCCT
GCCCGCCAGT ATAAGACCGA CCCCGGCCAC CCCGATATCT GCAACGTGTA CAAACTGCAT
AATTATTTCA GTCCCCAGGC AGTAGCCCAG ATTGCAGATG ACTGCCGGAA CGCCCGCATA
GGCTGTGTTC AGTGCAAACG GGCTCTGGCC GAAGCTATCA ACGTCTACTT GCGCCCCATC
CGGGCAAAAA GAAGCAAGCT GGCTGAAAAC CCTGATGAGA TTTACCGCAT TATGGCAGAC
GGGGCGGAAC GGGCAGGAGC GATAGCCCGG GAGACTATTG ATGAAGTCCG CCGGAAAATG
AATCTCCGCT GA
 
Protein sequence
MKRVFSGVRP TGRLHLGNYL GAVKNYVALQ DDYECIYCVV DIHALTTLEE TDALKENIYE 
MMLDLLASGL DPKKCILFVQ SQVPEINELF TLFGMITPLS WLLRVPTFKE KVRMHPDNVN
YGLVGYPVLQ AADISLYKAD LVPVGVDQLP HLELTREIVR RFNEKFGDTF PEAQARLTNF
PTVVGLDGKD KMSKSLNNHI ELALSEEETA KKVMSAVTDP ARQYKTDPGH PDICNVYKLH
NYFSPQAVAQ IADDCRNARI GCVQCKRALA EAINVYLRPI RAKRSKLAEN PDEIYRIMAD
GAERAGAIAR ETIDEVRRKM NLR