Gene DET1331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1331 
SymbolhisA 
ID3229406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp1205894 
End bp1206607 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content52% 
IMG OID637120893 
Product1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 
Protein accessionYP_182042 
Protein GI57233941 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 
TIGRFAM ID[TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATAGAAATAA TACCGGCAAT AGATATTTTA GGCGGCAGGT GTGTCCGCCT TCTTCAGGGT 
GATTATGCTC AGGAGACAGT GTACTCTCCT GACCCGGTGG GTACAGCCAT GCGCTGGCAA
TCTTTGGGTG CTCCCCGCCT GCATGTGGTG GATTTGGACG GTGCTGCCGA CGGGGAAAGT
GTTAACTTTG AGCTTATACG GGAAATAGCC AATTCGGCCC TTATACCGGT GGAAGTGGGC
GGCGGTATCC GCAGTATGGA TACGGTAAAG AAACTGCTTA CGGCCGGGGT TGACCGGGTA
ATACTGGGTA CGGTAGCGGT GGAAAACCCG GAGCTGGTCA GGGAAATATG TGCCAGATAC
GCTGACTCGG TAGCCGTCAG TATAGACGCC AGGAATGGCA AGGTGGCCAC TCGCGGCTGG
GTAAACAGTA CCGAAGTGGA TGCTTTGGAA CTGGCCCGCA GTATGAAAAA ACTGGGTGTG
AAGCGTTTTA TTTACACTGA TATAAGCCGT GACGGCACTC TGAGTGAGCC TAACTTCGCG
GCTATACGAG ACCTTATTTC GGCTATAAAT ATGCCGGTTA TAGCTTCAGG GGGTGTTTCC
AGCCTGAGCC ATTTGCGCCT TTTGAAAGAT ATCGGTGCGG AGGGGGCTAT TGTGGGCAAG
GCCATTTATA CCGGTGACCT GAACCTTAAA CGGGCCTTTG AAGAGTTGTC CTAG
 
Protein sequence
MEIIPAIDIL GGRCVRLLQG DYAQETVYSP DPVGTAMRWQ SLGAPRLHVV DLDGAADGES 
VNFELIREIA NSALIPVEVG GGIRSMDTVK KLLTAGVDRV ILGTVAVENP ELVREICARY
ADSVAVSIDA RNGKVATRGW VNSTEVDALE LARSMKKLGV KRFIYTDISR DGTLSEPNFA
AIRDLISAIN MPVIASGGVS SLSHLRLLKD IGAEGAIVGK AIYTGDLNLK RAFEELS