Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1331 |
Symbol | hisA |
ID | 3229406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 1205894 |
End bp | 1206607 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637120893 |
Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
Protein accession | YP_182042 |
Protein GI | 57233941 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATAGAAATAA TACCGGCAAT AGATATTTTA GGCGGCAGGT GTGTCCGCCT TCTTCAGGGT GATTATGCTC AGGAGACAGT GTACTCTCCT GACCCGGTGG GTACAGCCAT GCGCTGGCAA TCTTTGGGTG CTCCCCGCCT GCATGTGGTG GATTTGGACG GTGCTGCCGA CGGGGAAAGT GTTAACTTTG AGCTTATACG GGAAATAGCC AATTCGGCCC TTATACCGGT GGAAGTGGGC GGCGGTATCC GCAGTATGGA TACGGTAAAG AAACTGCTTA CGGCCGGGGT TGACCGGGTA ATACTGGGTA CGGTAGCGGT GGAAAACCCG GAGCTGGTCA GGGAAATATG TGCCAGATAC GCTGACTCGG TAGCCGTCAG TATAGACGCC AGGAATGGCA AGGTGGCCAC TCGCGGCTGG GTAAACAGTA CCGAAGTGGA TGCTTTGGAA CTGGCCCGCA GTATGAAAAA ACTGGGTGTG AAGCGTTTTA TTTACACTGA TATAAGCCGT GACGGCACTC TGAGTGAGCC TAACTTCGCG GCTATACGAG ACCTTATTTC GGCTATAAAT ATGCCGGTTA TAGCTTCAGG GGGTGTTTCC AGCCTGAGCC ATTTGCGCCT TTTGAAAGAT ATCGGTGCGG AGGGGGCTAT TGTGGGCAAG GCCATTTATA CCGGTGACCT GAACCTTAAA CGGGCCTTTG AAGAGTTGTC CTAG
|
Protein sequence | MEIIPAIDIL GGRCVRLLQG DYAQETVYSP DPVGTAMRWQ SLGAPRLHVV DLDGAADGES VNFELIREIA NSALIPVEVG GGIRSMDTVK KLLTAGVDRV ILGTVAVENP ELVREICARY ADSVAVSIDA RNGKVATRGW VNSTEVDALE LARSMKKLGV KRFIYTDISR DGTLSEPNFA AIRDLISAIN MPVIASGGVS SLSHLRLLKD IGAEGAIVGK AIYTGDLNLK RAFEELS
|
| |