Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1324 |
Symbol | |
ID | 3229421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 1201992 |
End bp | 1202900 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637120886 |
Product | hypothetical protein |
Protein accession | YP_182035 |
Protein GI | 57233956 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000450557 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAACA GAGTATTTGT CAGCGGCGGC AGCGGTTTTG TAGGCGGGCA TTTGCTGCCC CGGCTGGCTG AAAACGGCTT TAAAATCCGT CTGCTGGTTA TGAATGAGGC CGAAGCCAAA CGGGTAAAAA CCCCCGGAGT GGAGTTTGTG TATGGTACGG TAAATGACCT GCCGGTGCTT ATGGAGAGTA TGAAAGATAT CTTTGCCGTA ATCCATCTGG TGGCCATACT GCGTGAAAAT AAAGATATTA CCTTTGAGAA GGTAAATATA GAGGGCACAA AAAACATGCT GGCGGCGGCT GACCAAAACG GGGTGAAAAG ATTTATTCAC ATGGGGATAC TGGGTGCCAG TGCCGACCCC CGTTTTACTT ACCTCCATTC CAAGTATCTG GCTGAAGAAG CGGTCAGTAA GTCCGGTCTG GATTACAGCA TTTTAAAGCC TTCGGTCATG TTCGGGCAGG GAGCAGGTTT TATAACTGCC CTTATCCGTT CATTTAAGCC CTATCCCTTA CTTGCCCCGG TTGCCGGAAA CGGCAAAACC CGCCTTCAGC CCATTTGGGT GGAGGACGTG GTCAGCTGCC TGCTGAAAAT GCTGGACGGG GAAAAGATAC ATCAGAGCGT ACAGATTGGC GGACCCCGGA TATTTACTTA TGATGAGGTT CTTTTGGCGG TGATGCAGGC TATGGGGGTA AAAAAGCCCC GTTTGCATGT ACCGGTGGGT TTAATGCGTC CGCTGGTCTG GCTGATGGAA CGCACCAGTT CCAACCCGCC CATTACTCTG CCGGAGTTGA AAGCTTTGTC GGTAGACAAT ATAACTGCCG AAGATGCCGT AAAGACAGAG TTCGGCTTTG ACCCCAAGCC TCTTTCGGAA GGGCTTGATT ACCTTAAGCC AGCTCCAGCC GTTCCTTAG
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Protein sequence | MTNRVFVSGG SGFVGGHLLP RLAENGFKIR LLVMNEAEAK RVKTPGVEFV YGTVNDLPVL MESMKDIFAV IHLVAILREN KDITFEKVNI EGTKNMLAAA DQNGVKRFIH MGILGASADP RFTYLHSKYL AEEAVSKSGL DYSILKPSVM FGQGAGFITA LIRSFKPYPL LAPVAGNGKT RLQPIWVEDV VSCLLKMLDG EKIHQSVQIG GPRIFTYDEV LLAVMQAMGV KKPRLHVPVG LMRPLVWLME RTSSNPPITL PELKALSVDN ITAEDAVKTE FGFDPKPLSE GLDYLKPAPA VP
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