| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1293 |
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| Symbol | |
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| ID | 3229368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 1178470 |
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| End bp | 1179654 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637120855 |
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| Product | sensory box sensor histidine kinase |
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| Protein accession | YP_182005 |
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| Protein GI | 57233903 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00147637 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAAAG CCGAACTTTT TCATTTATTT TTAGATAATA TGCTGGATGC GGTGGCGGTT
TATGAAGCCT CTGGGGAAGG AAAGCCGCTC AAATTCCTGG AGGCCAACGG GCAAATGTGC
CGTTACCTCG GCCATACCCA TGAAGATTTT TTAAGGATAC AGCCTGCGGA TGTCAGTTTT
GAGTGTTTCA ATATAAACCG GATTGTATGG CTGGACCTGC TGGAAAGCCG TTACCTTTCA
ATAGAATACC TGTATAATAC CAAAGACAAC AGGTCTGTAC CTATAGAAAT ACATTATCAT
TTATTCCAGC TGGATGAAAG AAATCTGGTA TTTTTAACTA TCCGGGATAT TTCTGAACGC
AAAAAGGCTG AAGAGAAGCA ACGCAGATTA GAAAAAGACC TTAATCTTTC CAGCCGCTTA
GCCTCGGTGG GTGCGCTCAC AGCCGGAGTA GCTCATGAGA TAAACAGCCC GCTTACCAGT
ATTCTCGGTT TTTCGGAAAG GCTGGCCCGT AAATGCACCA GCGAAGAACA GCACCGGGAT
ATTGAGCGTA TCCATACGGA AGCCTTGAGG GCGGCCAAGG TAATAGATAA CCTGCGCACA
TTTGCCCGCA GCTACCAGCA GGAAAAGAAG CTGTGCGGAC TTAATGAAAT TATCCGTAAA
TCTGTGGAAC TGCGTGAATA CGAGCTGGTT GTGCAGAATA TAGTAGTGGA ACTGGAACTG
GCGGAAAATC TGCCGGCTAC TTTGCTGGAT TTTTACAAGA TACAGCAGGT GCTGGTTAAT
ATGATACTTA ATGCCGAACA GGCCATGTAT CAGGCTCACG GGCGGGGCAG GCTGCTTATT
AAGACCCAGA ATATGGGCAA TTATATCCGC ATGATAATAG AAGATAACGG GCCGGGTATT
TCACCAGAAA TTGCGGAAAA GGTATTTGAC CCGTTTTTCA CCACTAAGGA AGACAGCCGG
GGTACGGGGC TGGGACTGAG TGTGTGTTAC GGTATTATTA TGGAACATGA CGGCAAGATA
CAGCTTGAAA GCAAGCTGGG CCAGGGAACG CGGTTTATTA TAGATTTGCC TGTTAAAAAC
AGCCGGATAT CCCGGAAAAA GGCCGCCGAA GTAGTGGTGG TGAAGGTAAA CGCTAAGACC
CCCGCAAAAT TGCCGAAATC TTTGCCTCAA AATCTGCCTG ACTAA
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| Protein sequence | MEKAELFHLF LDNMLDAVAV YEASGEGKPL KFLEANGQMC RYLGHTHEDF LRIQPADVSF
ECFNINRIVW LDLLESRYLS IEYLYNTKDN RSVPIEIHYH LFQLDERNLV FLTIRDISER
KKAEEKQRRL EKDLNLSSRL ASVGALTAGV AHEINSPLTS ILGFSERLAR KCTSEEQHRD
IERIHTEALR AAKVIDNLRT FARSYQQEKK LCGLNEIIRK SVELREYELV VQNIVVELEL
AENLPATLLD FYKIQQVLVN MILNAEQAMY QAHGRGRLLI KTQNMGNYIR MIIEDNGPGI
SPEIAEKVFD PFFTTKEDSR GTGLGLSVCY GIIMEHDGKI QLESKLGQGT RFIIDLPVKN
SRISRKKAAE VVVVKVNAKT PAKLPKSLPQ NLPD
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