| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1287 |
|---|
| Symbol | |
|---|
| ID | 3229381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 1174249 |
|---|
| End bp | 1175001 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637120849 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_181999 |
|---|
| Protein GI | 57233916 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.917745 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAC TGCTGACAGT GGGCGAACTT GCCAAAATGG CCGGAGTGAG TATACGCACT
CTGCGCTTTT ACGATGTGCA CGGACTGCTG AAACCCCGCA GTTATACTGC TGCCGGATAC
AGGCAGTATG GCCGGGATGA GGCTTTGCGC CTTCAGCAGA TACTCTTTTA CCGTGAGCTG
GGGTTTTCAC TGGAAGAGGT AAAAAAGCTG GTTGATGACC CGGCTGTCAG CCTGCTTGAA
AACCTGCGCC GCCAGAACCG CCTGCTAAAG GACAGGGAAA AACAGCTCTT AGATTTGCAA
AATACAATTC AGAAAACTAT ATCCAGTCTG GAAGGGAAAA TAGAAATGGA AATAAACGAA
TATTATCAGG GTCTGCCCCA GGAGAAGATT GATTATTACC GCCGTGAAGC CCGCCGCCGT
TATGGCGAAG AGACAGTGCA GCGTTCCGAA GAGATGGTGG TAAAAATGGG TAAAACCAAA
ATGGCAGAGC TTCAGGCACA GGGGCAGTCT ATATTTGAAG AACTGGCTGA GAATATACCG
GGTGGCCCTG CCCAGCCTAT CGCTCAGGAG CTGATATCCA AATGGCGGAA ATGGCTTGAA
AACTTTGCCC GGTATACTGA CGAAGGCTTG CTTGGCCTGG CCAGAGGTTA CCGGGATGAC
CCTGAGTTCA GGGCCTTTTT TGACAAAATC CATCCCGGAC TGGCCGCTTT TATTGCAGAT
GCAGTCGAGG TGTATTTTAA AAAGTCAGTG TGA
|
|---|
| Protein sequence | MEKLLTVGEL AKMAGVSIRT LRFYDVHGLL KPRSYTAAGY RQYGRDEALR LQQILFYREL
GFSLEEVKKL VDDPAVSLLE NLRRQNRLLK DREKQLLDLQ NTIQKTISSL EGKIEMEINE
YYQGLPQEKI DYYRREARRR YGEETVQRSE EMVVKMGKTK MAELQAQGQS IFEELAENIP
GGPAQPIAQE LISKWRKWLE NFARYTDEGL LGLARGYRDD PEFRAFFDKI HPGLAAFIAD
AVEVYFKKSV
|
|---|
| |