| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1285 |
|---|
| Symbol | |
|---|
| ID | 3229383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 1171954 |
|---|
| End bp | 1173138 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637120847 |
|---|
| Product | serine protease |
|---|
| Protein accession | YP_181997 |
|---|
| Protein GI | 57233918 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000207933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCG CCCAGAAATG GATAGGAGTA TTACTCAGCC TGGTACTGGT AGGGGTAAGT
GCGTTTAACA CGGTGCTTCT GCTTGACCAG AAAGACCAGC TTGAGACAGC TCAGGGGCAA
ATTTCGTCTT TGCAAAGCCA GCTTAGTCAG GCCGGGACTG ATATAAGTTC CCTTAAAAGC
CAGCTGACTG CTGTAGATGG CCATTTGGCT ACTCTGGATG GGCAAATTGA CGAACTGTTG
AAACTTTCTA CAGCTCAGGT GGATGCCATT GCTTCGGTAA TGGCTTCGGT GGTGTATATA
GAAGTAGATT ATTATGACCC GTCTACCGGT GAAAGAGGTA CTGTTTCCGG TTCGGGGACT
ATCATGGACA GCCGCGGCTA TATACTTACC AACCGCCATG TGGTGGAAAA TGCCACTCAC
GTTACCGTAG TTCTGCCCAA TAAGCAGATT TACGATGCCG ATGATTTCTG GACTGATGAT
TTTATGGATG TAGCCGTAGT TAAAATAGAT GCAGAAGGCC TGCAGGCGGC ATCTTTCGGT
GACCCCGCTA ACCTTAAAGT GGGTGATGCG GTAGTGGCTT TGGGTTATCC CTTGAGCATA
TCTCCCCTTG ATGGGGGTAT GACGGTAACC GCTGGTATTG TTAGCAATCT GGAAAACTGG
TTTTTCATAG ATGAAACGCC TTATTTTGAT GTAATCCAGA CAGATGCGGC TATAAACCCG
GGTAACTCCG GCGGCCCTAT GATAAACCTT CAGGGGCAAA TCATAGGGAT AAACAGTGCC
GGTATTCTGG ATGCCCAGAA TATGGGCTTT GCAATAAGTG TGGCTACTGC CAGGCATATT
TATGAAAGCC TGGTGGCAGA CGGCAGTTAC AGTCAACCCT ATTTGGGTAT AGATATTGAC
GACTATTATG ATGATATATC CGGCTTCCCC GGTGCTGAAG CCTCAACCGG GGTTGAGGTG
CTGGATGTTG AGTCCGGCAG TGTAGCCGCC CTGGCCGGTT TAAGGGATGG AGATGTTATT
TACCAGTTTA ACGGACAGGC TGTAACATCT TTCTCAGACC TGCTGCGCTT TCTCTGGAGG
ATGAATGCCG GAGATACAGT GGTGCTTGAA ACTAAGCGTA ACGGCATTGA GCGGACTATC
ACCATAACCC TGGATGAACG CCCGTTATCT TCATATTACA TTTAG
|
|---|
| Protein sequence | MTTAQKWIGV LLSLVLVGVS AFNTVLLLDQ KDQLETAQGQ ISSLQSQLSQ AGTDISSLKS
QLTAVDGHLA TLDGQIDELL KLSTAQVDAI ASVMASVVYI EVDYYDPSTG ERGTVSGSGT
IMDSRGYILT NRHVVENATH VTVVLPNKQI YDADDFWTDD FMDVAVVKID AEGLQAASFG
DPANLKVGDA VVALGYPLSI SPLDGGMTVT AGIVSNLENW FFIDETPYFD VIQTDAAINP
GNSGGPMINL QGQIIGINSA GILDAQNMGF AISVATARHI YESLVADGSY SQPYLGIDID
DYYDDISGFP GAEASTGVEV LDVESGSVAA LAGLRDGDVI YQFNGQAVTS FSDLLRFLWR
MNAGDTVVLE TKRNGIERTI TITLDERPLS SYYI
|
|---|
| |