Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1269 |
Symbol | |
ID | 3229413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 1157561 |
End bp | 1158259 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637120831 |
Product | HNH endonuclease domain-containing protein |
Protein accession | YP_181981 |
Protein GI | 57233948 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000309683 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATG AGATTAAACC GGGACAGGTA ATATCCTATC TTGATATGTG CCAAGCAGAG TCAGTCAATC TACAAAAAGG GATGAATTTC AAACTACGAA ATGGTCACAA TATTATACTT ATGAGTGTGC GTAATGGAGC ACCTTACGCT GACAGATTTG AGAACGATGG AACTATACTT ATATACGAAG GACATGACGT AAACAAAACA CCAGAACTCG TTAACCCAAA AAACATTGAT CAGCCAATGT ACACCCCAGG ACATAAACTT ACTGCTAACG GCCTTTTCTA TGAAGCCGCT CAAAAAGCCA AGCAAACCAA GATATTTCCT AAAGTTCGTG TTTATGAAAA GATAAAACCC GGCATATGGG TTTATAATGG TGTTTTCAAC CTAATTGATG CTTGGCAAGA GCCCTCTGAT AATCGTAAAG TCTTTAAGTT CAAACTAGAG CTAACTTCAG AGATTACTAA TGAAATAGCA ACGCCTACTT TAGATGCTGA TATAAGGGCT ATACCTTCAG ATATAAAACG AATTGTTTGG GCTAGAGACC AAGGTAAATG CGTAAAGTGC GGCAACAATT CAAACCTTCA TTTTGACCAT GTTATCCCCT ATTCCAAAGG TGGGTCATCG TTAATAGCTG AAAATATTCA ACTACTATGT GCCAGTTGTA ACCTCAGCAA GCATGCTAGC ATCGAGTAA
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Protein sequence | MTDEIKPGQV ISYLDMCQAE SVNLQKGMNF KLRNGHNIIL MSVRNGAPYA DRFENDGTIL IYEGHDVNKT PELVNPKNID QPMYTPGHKL TANGLFYEAA QKAKQTKIFP KVRVYEKIKP GIWVYNGVFN LIDAWQEPSD NRKVFKFKLE LTSEITNEIA TPTLDADIRA IPSDIKRIVW ARDQGKCVKC GNNSNLHFDH VIPYSKGGSS LIAENIQLLC ASCNLSKHAS IE
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