Gene DET1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1248 
Symbol 
ID3229460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand+ 
Start bp1138936 
End bp1139601 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content51% 
IMG OID637120810 
Producthypothetical protein 
Protein accessionYP_181960 
Protein GI57233995 
COG category[S] Function unknown 
COG ID[COG5658] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATAA ACTGGAAAGA ACACCGCCTG AGTCTTTTTA TTATACTGGC CATGTTTGTA 
ACCGGGCTGA TTACCTGGCC TAATGCCCCG GACTTGCTGC CGGTACACTG GGGGATTGAC 
GGAAGAGTAG ACCGCTACGG AGGCAAGTTT GAGGGCTTGC TGCTGATGCC CCTGATATGT 
CTTGGCATAT TTCTGCTGCT TATATACCTG CCCTACCTTG ACCCCCGCAA GGCTAACTAC 
CTGAAGTTTG AAAAAGTATA CAGCCTGATT ATCCGCCTGA TAGTGGTCTT CTTCGGGGGC 
ATTTATGGCA TAACCATACT CTATTCGTAC GGAGTAGTCG CCAATACCAG CACCTTTATT 
CTGATAATGG TAGGGCTGCT GCTGGCACTG CTGGGAAATA TGTTCGGCAA GCTCCGCCCC 
ACCTGGTTCG TGGGCATACG CACCGCCTGG ACATTAAGCA GTGACCTGTC ATGGGATAAA 
ACCCACCGTC TGGGCGGCAG AGTGTTTGTG GGTGCGGGTT TGCTGATGAT ACTGGCAGGC 
ATTACCGGTT TTGCATGGCT GATGATAGCC AGCCTGGCCT GTTTGTTACT GGGGATAATA 
GGCCTGTTTG TCTACTCTTA CCTGGTATGG AAAAAAGACC CGAATGCCAG GTCTTCCCGC 
CTGTAA
 
Protein sequence
MHINWKEHRL SLFIILAMFV TGLITWPNAP DLLPVHWGID GRVDRYGGKF EGLLLMPLIC 
LGIFLLLIYL PYLDPRKANY LKFEKVYSLI IRLIVVFFGG IYGITILYSY GVVANTSTFI 
LIMVGLLLAL LGNMFGKLRP TWFVGIRTAW TLSSDLSWDK THRLGGRVFV GAGLLMILAG 
ITGFAWLMIA SLACLLLGII GLFVYSYLVW KKDPNARSSR L