| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1240 |
|---|
| Symbol | |
|---|
| ID | 3229477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 1134961 |
|---|
| End bp | 1135590 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637120803 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin-type |
|---|
| Protein accession | YP_181953 |
|---|
| Protein GI | 57234011 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000181585 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCA CTAAAGCCCT TATTTTGGCT ACACTTTTCC CCGTAACCCT GTTTGCCAGC
GGCTGCAACG GCGGAGATGC CGCCCCTGAA GTAACCCCCA TGTCCTGGGA TGCTGCCCCG
GCCATGCAGA TAGACCCTGC CAAGCAATAT TTCGCCACGG TGGAAACCAC TTTGGGCAGC
TTCAAGATTG AGCTTTTTGC CTCCGAATCC CCCGTGACGG TTAATAATTT TGTATTTCTG
GCTAAAGAAA ACTACTACAA CGGGGTAATC TTCCACCGCA TAATGAAAGC TTTTATGATT
CAGACCGGTG ACCAGACCGG CACCGGCAGA GGCGGCCCGG GTTACCGCTT TGCTGATGAA
CTGCCGGTAA AACATTCGTA TGACCCCGGT ATAGTTGCCA TGGCAAATGC CGGCCCCAAT
ACCAACGGCA GCCAGTTCTT TATCTGTACC GGCGCACAAG CTAAAAACCT GGACTACCAG
CCCAACTACA CCCAGTTCGG CCGGGTGATT GAAGGAATGG ATGTGATTAC CAAGCTGGCG
TCAGTACCGG TAGTAGCTAA CAGTTATGGC GAGGTAAGCA CCCCCTCCAA TCCCCCCAAG
ATTATCAAGA TAACTATAAC CGAAGGCTAA
|
|---|
| Protein sequence | MKSTKALILA TLFPVTLFAS GCNGGDAAPE VTPMSWDAAP AMQIDPAKQY FATVETTLGS
FKIELFASES PVTVNNFVFL AKENYYNGVI FHRIMKAFMI QTGDQTGTGR GGPGYRFADE
LPVKHSYDPG IVAMANAGPN TNGSQFFICT GAQAKNLDYQ PNYTQFGRVI EGMDVITKLA
SVPVVANSYG EVSTPSNPPK IIKITITEG
|
|---|
| |