Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1238 |
Symbol | |
ID | 3229479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 1133960 |
End bp | 1134778 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637120801 |
Product | putative lipoprotein |
Protein accession | YP_181951 |
Protein GI | 57234013 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000496143 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAA GCCTCAGACG TATTGCCTTT ATGAGCCTTG TTTGCCTGCT TTTGGTACTC TCTGCCTGTG GCGGAGGAAA TGACCCTGAC AGTAACGCAT CTAATCCCCC CCCAGATGAT AACTCCAACA ATTCCTCCAA TCCGCCGCCT GTATATGACC CCTATGCCCA GTATGAGGGA TACCTGCTGC AAGGATACCC TGAGCAGATG TGGCCGCTTT ATGAGAGCAA GGCCATAAGC TCCTGCAATT TAGATGTGTT TTTCCCCGGT TTTAATATGA ACCCGGGATA TGTATGTACG TACAATGTTG TTTACTACAG CGAAAAGCCC AAAGCCGAGA TTGTAGCTTA TTATGCCGGG CTTGCCGGAA GCCTGAACCC TTCCAGCTTT TACGACGTGG ACACTGATAT AAATAATTAT CACTTTACCG CCAGAGTTGT AGAAGAAGGC AGCCGTAATC TGATTTACCT GGCGGCTGAT ATGCCTGATA ACTTTTATAC CGAACATCCT CTTTGGGGGG ATTTCCCGTC AGATGTATTC CCCGTTTTTA ACCTTACCCA GCAGCGATAC CATGACGTAG CCTGCCGGAG CAACGGAGAC GGTGAACTTC AGTACACCAA TCACTATAAT TTCAGCGGCG GCAGACAGGC CGCAGTGGAA TACTACCGCG CCCGGCTGCA GAATATGGCT GAATATGCCG AAACTACAAA TTCGGATAGT ACCTGCACAA CTCTTTCCGG CGTAGTACGC GGCTTTGACT TTCAGGTATT GATTTACGAT GACAATATTG CAGTTTTCCT GGAAAAGCCG TTTGACTAA
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Protein sequence | MKKSLRRIAF MSLVCLLLVL SACGGGNDPD SNASNPPPDD NSNNSSNPPP VYDPYAQYEG YLLQGYPEQM WPLYESKAIS SCNLDVFFPG FNMNPGYVCT YNVVYYSEKP KAEIVAYYAG LAGSLNPSSF YDVDTDINNY HFTARVVEEG SRNLIYLAAD MPDNFYTEHP LWGDFPSDVF PVFNLTQQRY HDVACRSNGD GELQYTNHYN FSGGRQAAVE YYRARLQNMA EYAETTNSDS TCTTLSGVVR GFDFQVLIYD DNIAVFLEKP FD
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