Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1215 |
Symbol | xerD |
ID | 3229484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 1114487 |
End bp | 1115395 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637120778 |
Product | tyrosine recombinase XerD |
Protein accession | YP_181928 |
Protein GI | 57234018 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.157843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGATG ATATACAAAG TTTTCTGAAC TACCTTATGG TTGAAAAGGG GTTTTCAGAA AATACCACTG AAGCTTACGA GAATGATCTT CGCCAGATGA TGACTTTTGC AGATAAAGAA GCCGCCAAGT CCGGCAAGAT ACCCGGCTGG GAAAACTTTA CCCGCCAGAC CATGCTGGCC TATATGCTGG ACCTTAAGGA ACGGAATTAC GCCATAACTA CCGTAGTCCG CAAGATGGCG GCCGCCAAAA GCTTTTTTAA CTTCATGGTT GCCGAGGGCA AGCTAAAAGA AAACCCCACC GAAAATATCA GCACACCCAA AGTGGGCAAG CCGCTGCCTG ATGCTATCAG CATAAGCCAG GTCAGGGCTT TACTAAACCA GCCTGTTAAG TCTGGCAGTT CGGAAGCCAA GCGGGATAAG GCCATGCTGG AGCTTTTGTA TGCTTCGGGT ATGCGGGTTA CCGAACTGGT AAACCTGAAC GTGCTGGATG TAGACCTGAA AGAAGGTTTT GTGCGCTGTT TCGGCAAGGG GCGCAAAGAG CGGATGATAC CCATCTATCC TCAGGCTGCC CAGAGCATAC AGGAATATTT AACCGAAATC CGCCCCAATC TGGTGCGGGC TGAAACCGAA AAAGCTCTGT TTTTAAACAG GCGGGGAGAC CGCTTAACCC GTCAGGGTTT GTGGCAGATT TTAAAGGGTT ATGCCCGTGA AGCCGGTCTG GATGACGTGG TCACCCCCCA CACCCTGCGC CACAGTTTTG CCACCCATAT GCTTTCCGGC GGGGCAGATT TGCGTTCGGT GCAGGAGCTG CTGGGTCATG CCAATATTTC TACTACCCAG ATATATACCC ACCTTACTTC CGAGCATATA AAGCGGAGTT ATGAAAAAGC CCATCCCCGG GCTAAATAG
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Protein sequence | MRDDIQSFLN YLMVEKGFSE NTTEAYENDL RQMMTFADKE AAKSGKIPGW ENFTRQTMLA YMLDLKERNY AITTVVRKMA AAKSFFNFMV AEGKLKENPT ENISTPKVGK PLPDAISISQ VRALLNQPVK SGSSEAKRDK AMLELLYASG MRVTELVNLN VLDVDLKEGF VRCFGKGRKE RMIPIYPQAA QSIQEYLTEI RPNLVRAETE KALFLNRRGD RLTRQGLWQI LKGYAREAGL DDVVTPHTLR HSFATHMLSG GADLRSVQEL LGHANISTTQ IYTHLTSEHI KRSYEKAHPR AK
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