| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1215 |
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| Symbol | xerD |
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| ID | 3229484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 1114487 |
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| End bp | 1115395 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637120778 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_181928 |
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| Protein GI | 57234018 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.157843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTGATG ATATACAAAG TTTTCTGAAC TACCTTATGG TTGAAAAGGG GTTTTCAGAA
AATACCACTG AAGCTTACGA GAATGATCTT CGCCAGATGA TGACTTTTGC AGATAAAGAA
GCCGCCAAGT CCGGCAAGAT ACCCGGCTGG GAAAACTTTA CCCGCCAGAC CATGCTGGCC
TATATGCTGG ACCTTAAGGA ACGGAATTAC GCCATAACTA CCGTAGTCCG CAAGATGGCG
GCCGCCAAAA GCTTTTTTAA CTTCATGGTT GCCGAGGGCA AGCTAAAAGA AAACCCCACC
GAAAATATCA GCACACCCAA AGTGGGCAAG CCGCTGCCTG ATGCTATCAG CATAAGCCAG
GTCAGGGCTT TACTAAACCA GCCTGTTAAG TCTGGCAGTT CGGAAGCCAA GCGGGATAAG
GCCATGCTGG AGCTTTTGTA TGCTTCGGGT ATGCGGGTTA CCGAACTGGT AAACCTGAAC
GTGCTGGATG TAGACCTGAA AGAAGGTTTT GTGCGCTGTT TCGGCAAGGG GCGCAAAGAG
CGGATGATAC CCATCTATCC TCAGGCTGCC CAGAGCATAC AGGAATATTT AACCGAAATC
CGCCCCAATC TGGTGCGGGC TGAAACCGAA AAAGCTCTGT TTTTAAACAG GCGGGGAGAC
CGCTTAACCC GTCAGGGTTT GTGGCAGATT TTAAAGGGTT ATGCCCGTGA AGCCGGTCTG
GATGACGTGG TCACCCCCCA CACCCTGCGC CACAGTTTTG CCACCCATAT GCTTTCCGGC
GGGGCAGATT TGCGTTCGGT GCAGGAGCTG CTGGGTCATG CCAATATTTC TACTACCCAG
ATATATACCC ACCTTACTTC CGAGCATATA AAGCGGAGTT ATGAAAAAGC CCATCCCCGG
GCTAAATAG
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| Protein sequence | MRDDIQSFLN YLMVEKGFSE NTTEAYENDL RQMMTFADKE AAKSGKIPGW ENFTRQTMLA
YMLDLKERNY AITTVVRKMA AAKSFFNFMV AEGKLKENPT ENISTPKVGK PLPDAISISQ
VRALLNQPVK SGSSEAKRDK AMLELLYASG MRVTELVNLN VLDVDLKEGF VRCFGKGRKE
RMIPIYPQAA QSIQEYLTEI RPNLVRAETE KALFLNRRGD RLTRQGLWQI LKGYAREAGL
DDVVTPHTLR HSFATHMLSG GADLRSVQEL LGHANISTTQ IYTHLTSEHI KRSYEKAHPR
AK
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