Gene DET1202 details

Gene Information

• Locus tag: DET1202
• Symbol: carB
• ID: 3229505
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 1097532
• End bp: 1100801
• Gene Length: 3270 bp
• Protein Length: 1089 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637120765
• Product: carbamoyl-phosphate synthase, large subunit
• Protein accession: YP_181915
• Protein GI: 57234039
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit; [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGAAAGC AAAAAGGAAT ATGCGAAGTG ATGAATAAAC CCAAAAAAGT TCTTATTATC 
GGCTCCGGCC CGATTATCAT CGGCCAGGCT GCCGAATTTG ATTACGCCGG TACCCAGGCC 
TGCAAAGCCA TGCGCGAAGA AGGAGTGGAA TCCATACTGG TAAACTCCAA CCCGGCTACT 
ATTATGACTG ACGAAAATGT TGCGGACAGG GTATATATTG AACCCCTGAC TGTTGAATCT 
ATAACCAAAA TCATTGAAAA AGAACGGCCT GACGGTTTGC TGCCTACTTT GGGCGGGCAG 
ACCGGGCTTA ACCTGGCGGT AGACCTGGCA GATGCGGGCG TGCTTGCCAA GTACAATGTA 
CGTTCCTTGG GCACTCCCAT AAATACCATC CGCACCGCCG AAGACCGCGA ACTTTTTAAA 
GAACTGCTGG CCAAAATAGG CGAACCTGTC CCCCCTTCGG AGACAGTAAC CACCGCCGAA 
GACGCACTTA AAGTTGCCCG CGAAATAGGC CTGCCGGTGG TAATACGCCC GGCGTATACC 
TTAGGCGGCA CAGGCGGCGG TTTTGCCAAT AACTGGGAGG AGGTAGAGGA GGTAGCTCAA 
ACGGGACTGA ATGCCTCACC CATCCACCAG ATACTGGTAG AAAAATCGGT TGCCGGCTGG 
AAAGAAATTG AATACGAAGT AATGCGTGAC GGGGCGGACA ACTGCATTAC CATATGCAAC 
ATGGAAAATT TTGACCCCAT GGGAGTCCAT ACCGGAGACA GCATTGTAGT TGTCCCGGTG 
CAAACCCTTA CCAACAAAGA ATCCCAGATG CTGCGCACCG CTTCCATCAA GATAATACGG 
GCGCTGGGTA TTGAGGGCGG CTGTAACGTA CAGCTTTCTC TAAACCCGAA CGGCAATGAA 
TATTATGTAA TTGAGGTTAA TCCCAGAGTA TCCCGTTCAT CAGCCCTGGC CAGCAAGGCT 
ACCGGCTACC CCATTGCCAG AGTGGCATCC AAGATAGCCA TTGGCAAACG GCTGGACGAA 
ATACCAAACG CGGTTACTGG CAAGACTCTG GCCTGCTTTG AGCCGGCGGT AGACTATATA 
GTAGCCAAAA TCCCCCGCTT CCCCTTTGAC AAGTTTGCAC TCGGTGACCG CGGACTTGGC 
ACCCAGATGA AAGCCACCGG CGAAGTAATG GCCATTGACC GCAGCTTTGA AGCGGCTATC 
CACAAATCTA TCCGCTCTCT GGAGTTCGGC AAGAAAACCA TACTCTGGGA AGACCGAAGC 
TGGATAATGG GAGATAACCT TTCCACCTAC CCCCTGCACG CCCATGATAC CCGTTTATGG 
GCAATACTGG CCGCTCTGCG CCGCGGGCAT ACACCCGAAG CTATCCACGA AAAAACAAAG 
ATAGACAACT GGTTTTTATA CAAACTTAAA AACATTACCG ATATGGAAAA ACGCCTGCTT 
AAGGAAAACC TGACCCCGGA GCTGATGCTT CAAGCCAAAA AACTGGGTTT TTCTGATGAA 
GAAATCGCCA CCCTGTCAGG CAAACTAGCC GAACAGATAC GCCAGATGCG CCTGGAGTGG 
AATATAAAAC CGGTGTTTAA AATGGTAGAC ACCTGTGCCG CCGAATTTGA TGCCGCCACC 
CCTTACTTCT ACTCCACTTA TGACGAAGAA AATGAGGCTC TGCCTGAGAA TATTAAAAAG 
GCCGTAGTTA TAGGTTCAGG CCCTATCCGC ATAGGTCAGG GTATAGAGTT TGACTATTGC 
TCGGTGCATG CCGCCTGGGC TTTGGAAAAG GCAGGCTTGC AGAGCATTAT GATAAACTCC 
AACCCCGAAA CGGTGTCTAC AGATTTTGAT ACCTCAAACC GCCTTTATTT TGAATCTCTG 
GACGAAGAGA GTGTCCGGGA TATACTGGAA AATGAAAACA TTTCCGCCCC CGAATCCACC 
CCCAGCATTG TCCAGTTCGG CGGGCAGACA GCTATAAATC TGGCCTCACC CCTTACCCGC 
AGCGGCAACC CCATTATCGG CTCATCAGCC GAAGCTATAG ATTTAGCCGA AGACCGCCGC 
CGCTTTGAAC GGCTGCTTTC GGAAATGGGC ATACCCCAGG CGCCGGGTGC CGGCATAACC 
ACTCTGGACG AAGCCCTGAG CATAGCTGAA AGCATTGGCT ACCCGGTAGT AGTCCGCCCA 
AGTTACGTAC TGGGAGGACG GGCGATGGAA ATAGTCAGTG ACGCATCTGA CCTGATACGT 
TATATGAGCG CCGCCATAGA GCTGAATACC GGACACCCCA TTTTGATAGA CAAATATCTG 
GTGGGCAAGG AAGTGGAAGT TGACGCCATT GCAGACGGGG AAACCGTGTT TATCCCCGGC 
GTTATGGAGC ATATTGAACG GGCCGGCGTC CACAGCGGGG ACTCTATGGC AGTCTATCCC 
ACCCAGAACC TGAATGCCCA TGACCTGGCC ACCATTTCAG ACTATACCAT ACGCATAGGC 
AAAGCCCTGA ACGTACGCGG GCTGATGAAT ATCCAGTTTG TAGTTTCCAA AGACCCCGAG 
GGGGGAGACA ATATAGTCTA TATACTGGAA GTAAACCCCA GAGGTTCACG CACCGTACCC 
TTCCTTTCAA AGGTTACAGG AGTGCCCATG GTAGATATAG CGGTGAACGT GATGCTGGGC 
AAAACTATTA AAGAGCAGGG CTATCAAAAC GGGATTATGC CCCATACGGA TTTGGTTGCC 
ATAAAAGCCC CGGTTTTCTC CATGGCAAAA CTGGTGGGGG TAGATACCTA CCTTGGGCCG 
GAAATGAAAT CCACCGGCGA AGTCATGGGG GTAGACCACA CCTTTAATAA AGCCCTGGTA 
AAAACCCTTC AGGCGGCCTC TATAATGCTG CCCGAAAAAG GCACTCTTCT TTTTAGCGTA 
GCTGACCGTG ACAAGGCTGA AGCCTTGCCC CTTATCCGCA CCCTGCACGG GCTGGGATAC 
AATTTCTACG CCACCGAAGG CACTGCCGCC ATGATGACCG CCGCCGGTAT AACCGTTAAA 
CAGATAAGCA AAAAACTGGA TGAAGGCCAC CCCAATATTG TGGATATTAT CCGAAACGGC 
ACCGTCTGCG GGGTGATAAA TACCATGACC GGCGGCCGGG TACCCCTTAG GGACGGCTTT 
TATATCCGCC GGGCAGCTGC CGAACGCAAA GTGCCTTGCT TTACCTCTAT GGATACCGCT 
AAAGCCGCAG TGGAAGCCTT AGCCAACGGC AACCGCCAGA TAACGGTCTT GCCGCTGAAT 
GAATACCGTC AGGGTAAAAG CGGCAGTTAG 

 

Protein sequence

MRKQKGICEV MNKPKKVLII GSGPIIIGQA AEFDYAGTQA CKAMREEGVE SILVNSNPAT 
IMTDENVADR VYIEPLTVES ITKIIEKERP DGLLPTLGGQ TGLNLAVDLA DAGVLAKYNV 
RSLGTPINTI RTAEDRELFK ELLAKIGEPV PPSETVTTAE DALKVAREIG LPVVIRPAYT 
LGGTGGGFAN NWEEVEEVAQ TGLNASPIHQ ILVEKSVAGW KEIEYEVMRD GADNCITICN 
MENFDPMGVH TGDSIVVVPV QTLTNKESQM LRTASIKIIR ALGIEGGCNV QLSLNPNGNE 
YYVIEVNPRV SRSSALASKA TGYPIARVAS KIAIGKRLDE IPNAVTGKTL ACFEPAVDYI 
VAKIPRFPFD KFALGDRGLG TQMKATGEVM AIDRSFEAAI HKSIRSLEFG KKTILWEDRS 
WIMGDNLSTY PLHAHDTRLW AILAALRRGH TPEAIHEKTK IDNWFLYKLK NITDMEKRLL 
KENLTPELML QAKKLGFSDE EIATLSGKLA EQIRQMRLEW NIKPVFKMVD TCAAEFDAAT 
PYFYSTYDEE NEALPENIKK AVVIGSGPIR IGQGIEFDYC SVHAAWALEK AGLQSIMINS 
NPETVSTDFD TSNRLYFESL DEESVRDILE NENISAPEST PSIVQFGGQT AINLASPLTR 
SGNPIIGSSA EAIDLAEDRR RFERLLSEMG IPQAPGAGIT TLDEALSIAE SIGYPVVVRP 
SYVLGGRAME IVSDASDLIR YMSAAIELNT GHPILIDKYL VGKEVEVDAI ADGETVFIPG 
VMEHIERAGV HSGDSMAVYP TQNLNAHDLA TISDYTIRIG KALNVRGLMN IQFVVSKDPE 
GGDNIVYILE VNPRGSRTVP FLSKVTGVPM VDIAVNVMLG KTIKEQGYQN GIMPHTDLVA 
IKAPVFSMAK LVGVDTYLGP EMKSTGEVMG VDHTFNKALV KTLQAASIML PEKGTLLFSV 
ADRDKAEALP LIRTLHGLGY NFYATEGTAA MMTAAGITVK QISKKLDEGH PNIVDIIRNG 
TVCGVINTMT GGRVPLRDGF YIRRAAAERK VPCFTSMDTA KAAVEALANG NRQITVLPLN 
EYRQGKSGS