| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1196 |
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| Symbol | pcrA |
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| ID | 3229519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 1091057 |
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| End bp | 1093273 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637120759 |
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| Product | ATP-dependent DNA helicase PcrA |
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| Protein accession | YP_181909 |
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| Protein GI | 57234053 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACA TACTTACAGG GCTAAACCCC GCTCAAAAAC AGGCCGTTGA AGCCGTGGAA
GGGCCGGTGC TTATACTGGC CGGTCCGGGC AGCGGTAAAA CCAGGGTTAT TACCCACCGG
ATTGCCTACC TGATTAAAGT AGTAGGTATA AACCCCCACC GCATTATGGC TGTTACCTTT
ACCAACAAGG CCGCCCGTGA AATGGAGACT CGCTTAAACC TGCTGGCTCC CTCAGCGGCG
GGACGCCTGA CTATGGGCAC TTTTCACGCT ATCTGCGCCC GCATACTCAG GCAGGACGGT
CTGCCTTTAG GTGTGCCGGC TGACTTTGTA ATATATGATG ATGATGACCA GCAAAGCCTT
ATCAAGCAGG CTATGGCCGA GCTTGAGCTG GACCCCAAGC GTTATCCGCC CGCTTCCATC
AGAAATGCCA TTAGCCAGGC CAAAAGCCAG CTGGTGCTTC CGGCGTATTA CTTTGAAAAA
GGCCGGAGCT ATTTTGAAGA GGTGGTAGGC AGGGTTTACG AACTCTACGA AAAACGCCTT
AAGCAGAACA AGGCGTTGGA TTTTGATGAC CTGCTGCTGA AGGTTGTTCA GCTGTTTAAG
CAGCACCCTG AGGTGCTGGC CAGATATCAG GAACGTTATC TGCATGTAAT GGTAGATGAG
TTTCAGGATA CCAATCTGGT TCAGTATGAG CTGGTAAAGA TGCTGTCTGC CAAGTATAAA
AATATTTGTG TGGTGGGTGA CCCTGACCAG TCCATTTATT CGTGGCGTTC GGCAGACCTG
AGAAATGTCT TTAATTTTGA GACAGATAAT CCGGGTGCCA AAGTGATTTT GCTGGAGCAG
AATTACCGCT CCACCAAAAA TATTCTGGAA GCGGCTTCGT GTGTAATTGC CCCGAACAGC
GGGCGTAAAC CTATCAGTTT GTGGACTGAA AACGAATCCG GCCAGCCTAT AGCAGTAGTT
GAAACCTTTA ACGAGCAGGA AGAAGCCCAG TTTGTGGTTT CTGAAATTGA GAAACTGACC
CGGTATGAAA AGTTCAGCCC CGGTGATATA GCTATTCTTT ACCGTACCAA TGCCCAGTCA
CGGGCTCTGG AAGAGGCATT TATCCGTTAT GGCATGCCTT ACCGTCTGGT TTCCGGCACC
CGCTTTTACC AGCGGCGTGA GGTTAAAGAT ATTGTAGCTT ATCTGCGTTT GCTGCAAAAC
CCTCAGGATA GCGTCAGCCT CCAGAGGGTT ATAAACATAC CCACCCGCGG AATAGGGGCT
AAAACCCTTT CAGATTTGGG CCAGTTTGCC AGAGAGCAGG ATATCAGCCT GTATGAATCA
CTTGTAAATT TATCAGATGA AAATACCCCC AAACCGCCCA TACCCAGCCG GGGCTTAAAA
CCCCTGACTG ACTTCGGTCT TTTACTGAAG TCACTGGTGG CGGATGCCCG TAATCTGCCC
CTTTTAAACC TGCTGGACAG GCTGCTTGAG GGTATAAATT ACCGTGAATT CCTGTTTGCC
TCCGAAGACG GGGAGGAGCG CTGGGATAAT ATACTTGAAC TGCGGACAGT TGCTCAGCAG
TATCAGGAAA TAGTCCCGCC CGAAGGGCTC TCGGTTTTTC TGGAAAGCGT GGCCCTGGTA
TCAGATTTAG ACAGCCTTGA GGAAGGTGTT TCGGCTGTTA CCCTTATCAC CCTGCATCAG
GCCAAAGGGC TGGAATACCC GGTGGTTTTC ATGGTGGGTA TGGAAGAGGG TGTCCTGCCG
CACAGCCGTT CGTTTGATGA CCCCGCCCAG ATGCAGGAAG AACGCCGCCT GTGTTATGTG
GGTGTAACCC GTGCCCGCAA GCGGCTTTAC CTGGTGCGGG CTTTCCGCCG CTCCCTTATG
GGGCAGAGCA ATGTAAACGA ACCCTCACGT TATCTTAAGG ATATACCCCA GAGTATCACC
AAAGGCCGTG AAAAACAGCC CTTGTCCGAG CAGCATACTG CCGCTTCGGC AGTTTCACCC
GTTATCAAAC AGCATCTGCA AAGTGCGGGC ATGTCCATTA AGTCAGCGTC TCCTCCCGCC
CCCAAACTGC TGGAACTGGA AGCGGGTGAC AGGGTGCTGC ACCCCCAGTT TGGCGAAGGG
ATTGTAACCA GTATCAACCG GGTGAAAAAT GATGCCGAGG TTATGATATC TTTCCATTCG
GTAGGCATGA AACGCCTGAT GCTCAGCTTT GCCCGCCTGA CCAAACTGGA AAACTAG
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| Protein sequence | MQDILTGLNP AQKQAVEAVE GPVLILAGPG SGKTRVITHR IAYLIKVVGI NPHRIMAVTF
TNKAAREMET RLNLLAPSAA GRLTMGTFHA ICARILRQDG LPLGVPADFV IYDDDDQQSL
IKQAMAELEL DPKRYPPASI RNAISQAKSQ LVLPAYYFEK GRSYFEEVVG RVYELYEKRL
KQNKALDFDD LLLKVVQLFK QHPEVLARYQ ERYLHVMVDE FQDTNLVQYE LVKMLSAKYK
NICVVGDPDQ SIYSWRSADL RNVFNFETDN PGAKVILLEQ NYRSTKNILE AASCVIAPNS
GRKPISLWTE NESGQPIAVV ETFNEQEEAQ FVVSEIEKLT RYEKFSPGDI AILYRTNAQS
RALEEAFIRY GMPYRLVSGT RFYQRREVKD IVAYLRLLQN PQDSVSLQRV INIPTRGIGA
KTLSDLGQFA REQDISLYES LVNLSDENTP KPPIPSRGLK PLTDFGLLLK SLVADARNLP
LLNLLDRLLE GINYREFLFA SEDGEERWDN ILELRTVAQQ YQEIVPPEGL SVFLESVALV
SDLDSLEEGV SAVTLITLHQ AKGLEYPVVF MVGMEEGVLP HSRSFDDPAQ MQEERRLCYV
GVTRARKRLY LVRAFRRSLM GQSNVNEPSR YLKDIPQSIT KGREKQPLSE QHTAASAVSP
VIKQHLQSAG MSIKSASPPA PKLLELEAGD RVLHPQFGEG IVTSINRVKN DAEVMISFHS
VGMKRLMLSF ARLTKLEN
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