Gene DET1192 details

Gene Information

• Locus tag: DET1192
• Symbol: lepB
• ID: 3229531
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 1087571
• End bp: 1088149
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637120755
• Product: signal peptidase I
• Protein accession: YP_181905
• Protein GI: 57234065
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0681] Signal peptidase I
• TIGRFAM ID: [TIGR02227] signal peptidase I, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTATAATT TGCCCCAGAT GAATGCTGCA AACTTGAAAA GCCTCCTGAT GGAACTAGCC 
GGTATAATCC TGGTAGCTTT GGTTATCTTC GGAATATCAA AAGTCACCCT GTCCTACTCT 
ATTGTAGACG GAAGCAGCAT GGACCCCACC CTCAAAGACG AACAGCGCCT GCTGGTAAAT 
AAGCTTGCAT ACCTGTTCGG AGAACCCCAG CGGGGCGATA TTATAGTTTT CCCCCCTCCG 
GAACAGTATT CTTATGAAAA TGACTTTATA AAGAGGATTA TCGGGCTGCC GGGTGACTCG 
GTAGAAGTAA AAGAAGACGG TACAGTCTAT ATAAATGACC AACCCTTATC CGAGCCGTAT 
GTTGTTTATC CCAAAGCTTT CCCCACCACC AAGGTTTATG TGCCGGAAGG GCAGTACTAT 
GTAATGGGAG ACAACCGGGT AGTCAGTCTT GACTCCCGTT ACGGGTTTTT TGTGGCCAGG 
GAAGATATTG TGGGCAAGGC CTGGGTATCA GTCTGGCCTC TGGGTGAATT TCACTTCTTG 
TCTGTTTTGC CTATTTTGCT CATAATGAAA CGGGATTAG 

 

Protein sequence

MYNLPQMNAA NLKSLLMELA GIILVALVIF GISKVTLSYS IVDGSSMDPT LKDEQRLLVN 
KLAYLFGEPQ RGDIIVFPPP EQYSYENDFI KRIIGLPGDS VEVKEDGTVY INDQPLSEPY 
VVYPKAFPTT KVYVPEGQYY VMGDNRVVSL DSRYGFFVAR EDIVGKAWVS VWPLGEFHFL 
SVLPILLIMK RD