Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1180 |
Symbol | |
ID | 3229549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 1078019 |
End bp | 1079932 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637120743 |
Product | ABC transporter, ATP-binding/permease protein |
Protein accession | YP_181894 |
Protein GI | 57234083 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGA ACAGAAATAC CCCTCAGTTA CGAATGCCGA TGGGCGGCAG ACCTATGGGC GGCGGCATGC ACATGGGCGG CGGACCTATG GGCGGAATGC GAATGGCACA ATCAGGTGAA AAGGCCAGAA ATTTTAAGGA CACCATGGCC AGCCTTTTGA AATACCTGAC ACCATACCGC TTTCCGCTTA TTATTGCTCT GGTATTAGCC ATTTTTGGTA CGGTATTTAC CATTATCGGC CCGAAACTGT TAGGCAATGC AACCACCAAG CTTTTTGAAG GCTTGGTCAG TAAAGTTACT AATGCAGCCG GTGCCGACAT TGATTTTACC TATATCGGCA ATATCGTACT GATTCTGGTC GGGCTGTACG TAATCAGTGC CATATGCAGC TATATTATGG GCTACATAAT GACCGGCGTA TCCATCAAGG TTACCTATGA CCTGCGCAAG CAGATAGCTG AAAAAATAAA CCGCCTGCCA ATGAAATTCT TTGACAACAA GACCTACGGC GAAGTGCTGA GCCACGTAAC CAACGATGTT GATTTGATAT CCAACACCCT GACCCAAAGC ATGTCACAAA TGGTTACCTC TATAGTTACC ATACTGGGCG TGCTGGTGAT GATGTTTACT ATAAACTGGA TTATGGCACT GGCTTCGCTG ATAATAGTCC CCATCTCTAT AGGCCTGATT TCAATGATTG TCGGGCGGTC CCAAAAATAT TTCCGCAAAC AACAGGACTA TCTGGGTCAT ATAAACGGCC ATGTGGAAGA AATGTATTCC GCCCACAATG TCATGAAAGC CTTTAACGGT GAGGCAAAAT CCATAGCCAA ATTCAAAGGG CTGAATGAAG AGCTATACAG TGCATCCTGG AAAGCCCAGT TTTTGTCCAG CATTATGATG CCCATGATGA ACTTCATAGG CAACCTGAGT TATGTGGTTG TATGTATTCT GGGCGGCTTT TTGGCCATAC AAAAAACTAT TCAGGTAGGT GACATACTGG CCTTTGTCCA GTATGTCAGG TCATTTACCC AGCCGCTGGC ACAAACCGCC AATATTGTAA ATGTACTCCA GTCTACAGCG GCAGCAGCCG AGCGTATTTT TGAATTTCTG GGAGAAGACG AGGAAGTACC CGAACCGTCT AACCCGGTTA GCCTGAAGGA TATTTCAGGT GCTGTCAGCT TTAAAGATGT GTCCTTTGGC TACAGCCCGG CTAAAACCAT AATTAAAGAT TTTAATGCGG ATATAAAACC CGGCCAGCGG GTAGCCATTG TAGGCCCTAC GGGTGCGGGG AAAACCACCA TGGTCAAACT GCTGATGCGC TTTTACGACG TAAACAGCGG GGCGATTCTG GTAGATGGGG TAAATATCCA GGATATAAAG AGACAGGAAT ACCGGAGTGC TTTCGGCATG GTACTTCAAG ATACCTGGCT CTTTAATGGC AGTATTATGG ATAATATCCG CTTCGGCAAG CTGGACGCAA CTGACGAAGA GGTTTATACC GCAGCCAAAA CTGCCTACGT AGATCATTTC ATACACACCC TGCCTAGCGG GTATGAAATG ATAATGAACG AGGAGTCCAG CAATATTTCC CAAGGTCAAA AACAGTTGCT GACCATTGCC AGAGCCGTTT TGGCCAACCC CAAGATTTTA ATTTTGGACG AAGCTACCAG CTCGGTAGAT ACCAGAACCG AAATGCTGAT ACAGCAGGCT ATGGAAAATC TGATGAAAGG CCGTACCGCA TTCATAATTG CCCACCGCCT GTCCACAATC CATAATGCAG ATATCATACT GGTAATGAAA GACGGTGCAA TTGTAGAACA GGGCAGCCAT GAAACACTGC TTGAAGCAAA CGGATTTTAT GCTTCGCTAT ATAACAGCCA ATTTGAAGCA GGGCCGGCAG AAGCAGACTC TTAA
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Protein sequence | MSQNRNTPQL RMPMGGRPMG GGMHMGGGPM GGMRMAQSGE KARNFKDTMA SLLKYLTPYR FPLIIALVLA IFGTVFTIIG PKLLGNATTK LFEGLVSKVT NAAGADIDFT YIGNIVLILV GLYVISAICS YIMGYIMTGV SIKVTYDLRK QIAEKINRLP MKFFDNKTYG EVLSHVTNDV DLISNTLTQS MSQMVTSIVT ILGVLVMMFT INWIMALASL IIVPISIGLI SMIVGRSQKY FRKQQDYLGH INGHVEEMYS AHNVMKAFNG EAKSIAKFKG LNEELYSASW KAQFLSSIMM PMMNFIGNLS YVVVCILGGF LAIQKTIQVG DILAFVQYVR SFTQPLAQTA NIVNVLQSTA AAAERIFEFL GEDEEVPEPS NPVSLKDISG AVSFKDVSFG YSPAKTIIKD FNADIKPGQR VAIVGPTGAG KTTMVKLLMR FYDVNSGAIL VDGVNIQDIK RQEYRSAFGM VLQDTWLFNG SIMDNIRFGK LDATDEEVYT AAKTAYVDHF IHTLPSGYEM IMNEESSNIS QGQKQLLTIA RAVLANPKIL ILDEATSSVD TRTEMLIQQA MENLMKGRTA FIIAHRLSTI HNADIILVMK DGAIVEQGSH ETLLEANGFY ASLYNSQFEA GPAEADS
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