Gene DET1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1174 
Symbol 
ID3229563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand+ 
Start bp1071173 
End bp1072276 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content50% 
IMG OID637120737 
Productiron ABC transporter periplasmic-binding protein 
Protein accessionYP_181888 
Protein GI57234097 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00124091 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TTATCCCATT TATACTGGCA CTCTCGCTGG TAGCCTGCAC AGTGGCTGGC 
TGCGGAGATA GCCAAACAGA TGACCCTTCA GACAACACCT CAACCCGTAC TATTACTGAC 
AGTGTGGGGC GTACGGTTGA AATCCCCACC GTAGTAGAGA AGATTGTCCC GCTGGGTAAT 
ACCCCCCGGA TGATTAGTTA TCTAGGTCTG GCGGACAAGG TAGTGGGACT GGGCGGCATG 
GATGCAAGCA ATGTTACCCC GGTTACCGCC TACGCTTATG CCAACAAAGA CGTATGGGCT 
AATGTACCCC TGGTGGGTAC AGATGCCGCC GGAGCAACCG ACTATTATCC GGAAGAAATT 
ATCAGCTGTG ACCCGGACGT AATCCTGTGT TCTTATACCA AAGAACTGGC TGATGAAATC 
CAGACCAAAA CCGGTATTCC GGTAGTGGCA GTGCCTATGG GCACTTTATT CGAGACTGAT 
TATAAAGATG CGCTCCGGCT GCTGGGAAAT GTCTGCGGCG TGGGAGCCCG GGCTGAAGCC 
GTTATTACTT ATATAAATGA CTGCCTGGCT GATTTGGCCA CCAGAACTGC CGGTATTCCG 
GACCAGGGCA AACCCTCGGT TCTGGGAGCG GCAGCTACCT TCAAGGGCAT GCACGGTCTG 
GACGGAGTAT ATACCAAATA TGCAGTTTTT GAGGTTATTT CCGCTAACGA CGTTACCGAA 
GGCCTATCCA ACACTTCCGG TGCTTTGCTA ATTGACAAAG AGCAGATTAT TGTCTGGAAT 
CCCCAGTACA TATTCCTGGA CAGCGGCGGT GTTGGTCTGG TCAGGGCTGA CTACAATGAC 
AATCCGGGCT TATATGCCCA GCTGACTGCA GTGCAGAGCG GCAATCTTTA TCAATATCCC 
AGCTCTACTT CATACTATTC CAACCTTGAA ATACCCATTG TAAACGCCTA TTATGTGGCC 
AGCCTGCTCT ATCCGGAGCA GTTCAGTGAC ATAGACTTCA ACCAGAAGGC TAACGAAATT 
TTCAGCTTTT TCCTGGGTAT TGACAACTAC CTGAGTATCT TAGAGTCTGC CGGGGCTGGT 
TACGGCAAAG TAACCCTTGG TTAG
 
Protein sequence
MKKVIPFILA LSLVACTVAG CGDSQTDDPS DNTSTRTITD SVGRTVEIPT VVEKIVPLGN 
TPRMISYLGL ADKVVGLGGM DASNVTPVTA YAYANKDVWA NVPLVGTDAA GATDYYPEEI 
ISCDPDVILC SYTKELADEI QTKTGIPVVA VPMGTLFETD YKDALRLLGN VCGVGARAEA 
VITYINDCLA DLATRTAGIP DQGKPSVLGA AATFKGMHGL DGVYTKYAVF EVISANDVTE 
GLSNTSGALL IDKEQIIVWN PQYIFLDSGG VGLVRADYND NPGLYAQLTA VQSGNLYQYP 
SSTSYYSNLE IPIVNAYYVA SLLYPEQFSD IDFNQKANEI FSFFLGIDNY LSILESAGAG 
YGKVTLG