| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1171 |
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| Symbol | |
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| ID | 3229566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 1067812 |
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| End bp | 1069410 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637120734 |
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| Product | reductive dehalogenase, putative |
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| Protein accession | YP_181885 |
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| Protein GI | 57234100 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1600] Uncharacterized Fe-S protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02486] reductive dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0464828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAG TAAATCGTAG AGATTTCCTC AAGGCCGCAG GTGTAGGTGC TGCTGGTCTA
GGAGTAGCCG CCGCTGGCAG TTACTGGAAT TCTTATCATG AGGGACAATC TGCATTCTCC
ATGCAGGGTC AGGAACACCG TCAAGGTCAT GAATATTTTA ATCGTGAACC ATTCCGTGTT
GACAAGGTTA CCCCTTTCAG CTGGGAGGTT ATCGGCCCTG ATTTGCCTAA TAACCATTCC
GTAGGGGGCA TACACCGCAT AGATATGCGT TGGTATTATG GTGAACGGTT TAAGAGTGCC
GGACATGCGG TATCTGGAAG TAGCCCGGCG CTGGGTTATG ACCTGACCAA AGGTGACCTG
GATGCTATGC CCAATACTTG GCCGTCCAAT GGTCTGGCTG GTTTGTCCAC TTTCTATCAG
GAGTACTATG ATCTGTATCC CATGATGGTG GATATAGACA AAGAGTACAA GTATGATTGG
CTTCCCCAGC TTGTTGAACG TTTTCAAGCA AGTATAGAAA GCAGAGCCAA TTTCAATGCC
AACGAAGGCC TTATTGCCAT GGCCAGATCT GAAGCTCAGA GAGCCGTTCC TGTCTCCAGT
ATCACGGCTC CGCCTGAAGA AAATGACTGG TCTGGTGTTT CAGCCAGACG GGCAGTATTT
GATTCTCCGG AGCTTGCCAG CCAGCTTGTT AAGCGTATGG CAGCTGACCT GGGTGCAACT
TTCGTAGGTG TTACCCCATT AAACAAGGGC TGGGTTGCCT ATAGTCATGC ACCTTTGGGT
GGCTTGGGCG GCGGTACCGG GGGGCGTGGG TTTGGCATCA ACACGCCTAT CAAAATACCT
GACTGGTGGG ACAATGCCAT CTTGGTAACC GGTACTATGA GCTGGGATGT AAACGCCGGT
GACCCAAACT ATGGTGACTC ATGGACAGGT TACAACATTT CATCCCAGAT AGCCCAGCAG
ATGGTCAAAT TCCTTAAATA TCTGGGTTAT CCTGCCCGTT GGCATTCCCC GTTCGGCGGA
TATGACTTCC CTGTTCCTGG TATCGCTGCC GAATGTGGTA TGGGTGAAAT TGGGCGCACC
TCTAACTGTC TTGCTCCTGA CTTTGGCGGT AACGTAAGAC CTGCCGTTAT TACTACCAGT
CTGCCTTTAG CCGCAGATAA ACCGGTAGAT TTTAACCTTG CAGAGTTCTG TAGCCGCTGT
AAATTGTGCG CTCAGGTCTG TCCTACTCAG GCTATAAGCT ATGATGACAA GCCCAAATTT
GAGATCTACG GGCAGCGCCG TTTCAACACT AATCTTGCTA AATGCCGCGA CGGTTGGAAT
CTGGGGGCCG GGCCTATGGG TTGCCGTGCC TGTATCTCAG TATGCCCGTG GACCAAAAAG
AACACTTGGG TACATCGCTT CGTGCGTGAA GTTTTGTCTC ATGATGCTAC TGGTACATCC
CAAAATATAG CTATCTGGGC AGAACGGACA CTCTATCCCA AGCATTATCA GGAAGAACTT
AATCCGCCTA ACTATCAGGG TGTTTACGAA CCTCCGAAGT GGATTCAAAC TAATGAATAT
GTCAGCAGTT TTGTCAATAC TCCAATGGGG GTGAAGTAA
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| Protein sequence | MTEVNRRDFL KAAGVGAAGL GVAAAGSYWN SYHEGQSAFS MQGQEHRQGH EYFNREPFRV
DKVTPFSWEV IGPDLPNNHS VGGIHRIDMR WYYGERFKSA GHAVSGSSPA LGYDLTKGDL
DAMPNTWPSN GLAGLSTFYQ EYYDLYPMMV DIDKEYKYDW LPQLVERFQA SIESRANFNA
NEGLIAMARS EAQRAVPVSS ITAPPEENDW SGVSARRAVF DSPELASQLV KRMAADLGAT
FVGVTPLNKG WVAYSHAPLG GLGGGTGGRG FGINTPIKIP DWWDNAILVT GTMSWDVNAG
DPNYGDSWTG YNISSQIAQQ MVKFLKYLGY PARWHSPFGG YDFPVPGIAA ECGMGEIGRT
SNCLAPDFGG NVRPAVITTS LPLAADKPVD FNLAEFCSRC KLCAQVCPTQ AISYDDKPKF
EIYGQRRFNT NLAKCRDGWN LGAGPMGCRA CISVCPWTKK NTWVHRFVRE VLSHDATGTS
QNIAIWAERT LYPKHYQEEL NPPNYQGVYE PPKWIQTNEY VSSFVNTPMG VK
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