| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1155 |
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| Symbol | nifD |
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| ID | 3229598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 1057395 |
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| End bp | 1059014 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637120718 |
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| Product | nitrogenase molybdenum-iron protein alpha chain |
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| Protein accession | YP_181869 |
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| Protein GI | 57234132 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01282] nitrogenase molybdenum-iron protein alpha chain
[TIGR01862] nitrogenase component I, alpha chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.450671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTAAAGG AATCAATATA TAACCCGGAG GAAATCAAGG ATAAGCTGGT TGCTGATTTT
CCTTCAAAAA TTGCCCGCAA AAGGGCTAAG GCTATTGTAG TTAATACCGG CACAGACGAA
ACACCCCAAA TTGCGGCCAA CGCCCGGACT GTTCCCGGCC TGATTACCAT GCGGGGCTGT
GCTTATGCAG GGTGCAAAGG CGTTATTTTG GGGCCCACCA GAGATGTTTT AAGCATTACT
CACGGCCCTA TCGGGTGCGG TTTTTATTCA TGGCTGACCC GGCGTAACCA GACCCGCCCG
CCCAAGCCGG AAGACGAAAA TTTTATGACT TACTGTTTAT CTACTGATAT GCAGGAGTCA
GAAATAGTCT TCGGGGGTGA GAAAAAACTG GCCCAGGCTA TAGAAGAGGC ATACCAGCTT
TTCAAGCCCA AGACCATAGT TGTTCATGCT ACCTGTCCGG TGGGTCTGAT TGGAGACGAT
ATCCATCAGG TTACCCGGGC GGCGCAGGAA AAACTGGGCA TCAAGGTTTT CGGTTTCAGC
TGTGAAGGCT ACAAGGGGGT CTCACAGTCT GCCGGACACC ATATAGCCAA CAACCAGATA
TTCAAGCATA TGGTGGGTAC GGATAACACC GCTTCGCCCT CACCCTACCG GGTAAATCTG
CTGGGTGAAT ATAACATCGG CGGGGACGCT TTTGTAATTG AAGACCTGTT TGCCCGCTGC
GGGTTTGAGC TGGTTTCAAC CTTCTGCGGC AACTCAGACC ATGACAGCAT GTGCCGTTCC
CATACTGCCG AACTTAATCT GGTCATGTGC CACCGTTCTA TCAACTATAT GGCTGATATG
ATGGAAACCA AATACGGCAT TCCCTGGATT AAGGTTAATT TTATCGGGGC GGAAGCAACT
GCCAAGTCCC TGCGCAAGAT TGCCCGTTAT TTCGGGGATG AAAAGCTGAT TGAACAGACC
GAACGGGTTA TTGAAGAAGA AATGCCGGCG GTTTCGGAAG CCCGCCAGCT GTACCAGGAA
CGCTGCCGCG GCAAGAAGGT GATGCTTTTT GTAGGCGGTT CACGCGCCCA CCACTATCAG
GAGCTTTTTA AAGAGCTGGG TATGGAAGTG GTGGCGGCCG GTTATGAATT TGCCCACCGG
GATGATTATG AAGGACGCAG GGTACTGCCC AGCATTACGG TGGATGCTGA TTCACGCAAT
ATTGAGGAGC TGACCGTAGA AAAAGACCCC GAAAGGTATA AGGAAAGAGT AAGCCCTGAG
AAATGCGCTG AGCTGGCTGC AAATGGGGTG GAATTTAAGG ACTATGCCGG TATGATGCCG
GAGATGGAAG CCGGGTCACT TACCATAGAC GAGCCCAGCC ACCACGAAAC ATTCCGCCTG
CTGGAACTCT ATAAGCCGGA TTTATATTGT GCCGGTGTTA AGGAAAAATA CGCAGTTCAG
AAAACCGGTA TACCCTGCCT GCAGCTTCAT AGCTACGATT ACGGCGGCCC GTTTGCCGGG
TTTGAAGGGG CAATTAACTT TTACAAAGAT GTTGACCGGC TGGTAAGCAG CCGTATCTGG
TCTTACCTTG AAGCACCCTG GCAGCGCCAG ACTCAGGTTA AAGCTACCTA TGGAATCTGA
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| Protein sequence | MVKESIYNPE EIKDKLVADF PSKIARKRAK AIVVNTGTDE TPQIAANART VPGLITMRGC
AYAGCKGVIL GPTRDVLSIT HGPIGCGFYS WLTRRNQTRP PKPEDENFMT YCLSTDMQES
EIVFGGEKKL AQAIEEAYQL FKPKTIVVHA TCPVGLIGDD IHQVTRAAQE KLGIKVFGFS
CEGYKGVSQS AGHHIANNQI FKHMVGTDNT ASPSPYRVNL LGEYNIGGDA FVIEDLFARC
GFELVSTFCG NSDHDSMCRS HTAELNLVMC HRSINYMADM METKYGIPWI KVNFIGAEAT
AKSLRKIARY FGDEKLIEQT ERVIEEEMPA VSEARQLYQE RCRGKKVMLF VGGSRAHHYQ
ELFKELGMEV VAAGYEFAHR DDYEGRRVLP SITVDADSRN IEELTVEKDP ERYKERVSPE
KCAELAANGV EFKDYAGMMP EMEAGSLTID EPSHHETFRL LELYKPDLYC AGVKEKYAVQ
KTGIPCLQLH SYDYGGPFAG FEGAINFYKD VDRLVSSRIW SYLEAPWQRQ TQVKATYGI
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