| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1122 |
|---|
| Symbol | |
|---|
| ID | 3229554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 1025338 |
|---|
| End bp | 1027038 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637120686 |
|---|
| Product | glutamine-dependent NAD(+) synthetase |
|---|
| Protein accession | YP_181837 |
|---|
| Protein GI | 57234088 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.049761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAAAT TGCGTTTAGC AATGGCACAA ATTGATAGCG TGGTGGGTGA TTTGGCCGGG
AATACGGCCT GTATTATCCG CCATATTCAA GAGGCTCGTT CACTTGGCGC AGACGTAATA
GTTTTTCCCG AACTGGCCAT CTGCGGCTAT CCGCCCGAAG ATTTACTCCA TAAACCCCGT
TTTGTTGAAG GTAATCTTCA CTCGCTTGAC TCTGTTATCA AAGCCTCAGA GGGTATTACG
GTTATTGTGG GGTATGTGGA TTCCCATAAC GGTCTGCATA ACTCTGCCGC CATTATTCAT
AATGCCAGCC TGATTGACAG TTATCATAAA ATATTCCTGC CTAATTACGG CGTGTTTGAT
GAGAACCGTT ATTTTCTGCC GGGTAACCGC TGCCCTGTGT ATACAATCTG CGGGCTTCGG
GTGGGGGTGA ATATCTGTGA AGATATCTGG TTTGCCTCAG GCCCGTCTAC CGCTCAGTCC
AACAAAGGGG CGGAGCTGAT TATCAATATC AGTGCTTCGC CCTATCATTT TGGCAAAAGA
AACCAGCGTG AAAAGATGCT CTCAGACCGC GCCCGGGAAA ACCGGGTCTA TATTGCCTAT
ACCAATATGG TGGGCGGTCA GGATGAGCTG GTATTTGACG GTGCCAGCAA TGTTTTTGAC
TATACTGGCA ATCTGGTGTT AAGGGGAAAA CAGTTTCAGG AAGATTTGCT GGTGCTGGAC
CTGGATATAC CGGCTTTAAC CCGGCAAGGA GATATGAGCA CTGAAATCCC GGACTCTATC
TTTGTTTCAG CATCAGGTCT TAGTGAACCA AAACTGCCGT TTGAAAATAG TGACAGTGTC
CCTCTGGATG CTGATGCAGA GGTTTATCAG GCGCTTTTAC TGGGTACTAA AGATTACATA
AATAAAAACG GCTTTAAGAA GGTGGTTATC GGTCTTTCCG GGGGGATAGA TTCCAGTCTG
GTAGCTGCTA TAGCCACAGA TGCCTTAGGT GCGGATAATG TAGTGGGGGT TATTATGCCC
TCCCGTTATT CTTCCGCAGG CAGTATTTCA GACAGTTTGC GTCTGGCGGA AAACCTGGGT
ATAAAAACCC TGCAAATCCC CATAGACCCC ATTTTCAAAT CCTTTCTGAG TACCCTTTCA
GAGGTATTTG CCGGAACTGA AACTGACACT ACCGAAGAAA ATATTCAGGC GCGTATCCGG
GGCAATCTGC TTATGGCCCT TTCCAATAAA TTTCACTGGC TGGTGCTTAA TACCAGCAAT
AAAAGCGAAA CCGCTATCGG CTACAGTACC CTGTATGGTG ATATGGCCGG CGGTTTTGCC
ATTATCAAGG ATGTTCCCAA GGTGCTGGTT TACCGCCTGG CTCACAACCG TAATAAATCA
GCCGGCTTTG AGCTGATACC CCATAATGTG CTCACTAAAC CGCCGTCTGC CGAACTTAAA
CCCAACCAGC TTGATACTGA TTCTTTGCCT CCTTATGAAT TGCTTGACCC TATTCTGGAG
GCTTATGTGG AGCAGGATAA AAGCATAGAC CAGATTGTGG CTTTGGGGTT TGAGGAAAGC
ATTGTTAAGC GGGTGGTCAA AATGGTAGAC CGGAGTGAAT ATAAACGCCG TCAGGCTCCT
CCGGGTATAA AAATCACTCC CAAAGCCTTC GGGCGTGACC GCCGTTTGCC TATTACCAAC
CGTTATAATC ATGTTGGCTG A
|
|---|
| Protein sequence | MGKLRLAMAQ IDSVVGDLAG NTACIIRHIQ EARSLGADVI VFPELAICGY PPEDLLHKPR
FVEGNLHSLD SVIKASEGIT VIVGYVDSHN GLHNSAAIIH NASLIDSYHK IFLPNYGVFD
ENRYFLPGNR CPVYTICGLR VGVNICEDIW FASGPSTAQS NKGAELIINI SASPYHFGKR
NQREKMLSDR ARENRVYIAY TNMVGGQDEL VFDGASNVFD YTGNLVLRGK QFQEDLLVLD
LDIPALTRQG DMSTEIPDSI FVSASGLSEP KLPFENSDSV PLDADAEVYQ ALLLGTKDYI
NKNGFKKVVI GLSGGIDSSL VAAIATDALG ADNVVGVIMP SRYSSAGSIS DSLRLAENLG
IKTLQIPIDP IFKSFLSTLS EVFAGTETDT TEENIQARIR GNLLMALSNK FHWLVLNTSN
KSETAIGYST LYGDMAGGFA IIKDVPKVLV YRLAHNRNKS AGFELIPHNV LTKPPSAELK
PNQLDTDSLP PYELLDPILE AYVEQDKSID QIVALGFEES IVKRVVKMVD RSEYKRRQAP
PGIKITPKAF GRDRRLPITN RYNHVG
|
|---|
| |