| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1109 |
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| Symbol | |
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| ID | 3229589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 1010792 |
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| End bp | 1014019 |
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| Gene Length | 3228 bp |
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| Protein Length | 1075 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637120673 |
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| Product | helicase/SNF2 domain-containing protein |
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| Protein accession | YP_181824 |
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| Protein GI | 57234123 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCT TTGACAATGT CACGGATATA GTCCGGGACG ACTTAAAACA GACGGTGAAG
CGTGGCAGCA AGGTTTCCAT TGCCGCTGCA TGCTTCTCCA TGTACGCATA TAAGGAGCTG
AAGGCTCAAC TGGAGCAGGT GGACGAGTTC CGCTTTATTT TCACGTCTCC GACCTTCATC
AAGGAGAAGG CTGAGAAGCA AAAACGCGAA TTTTATATTC CTCGTCTCAG CCGTGAGAGC
AGTTTATATG GTACAGAATT TGAAATCAAG CTGCGTAACG AAATGACGCA GAAGGCCATC
GCCAAGGAGT GCGCGGATTG GATCAGACGT AAGGCGACTT TCAAGTCCAA TGTTACCGGA
GAGAACATGG GCGGCTTTAT GACTGTCGCT GCGCCTGCAG AGGAAGTGGC CTATATGCCG
ATGAACGGTT TCACGACCGT AGACATCGGA TGCGAACGTG GCAATAACAG CTACAACATG
GTCAACCGTA TGGAGGCTCC GTTCTCTACG CAGTACATGC AGCTTTTCGA GTCGCTTTGG
AATGACAAGG ATAAGATGCA GGACGTAACT GATGTTATTA TTTCCAATAT CAGTACGGCC
TACAATGAGA ACTCACCGGA ATTCATCTAT TTCATGACGC TTTACAATGT TTTCAGTGAG
TTCCTCGACG ATATATCAGA GGACGTCCTC CCGAACGAAG CCACGGGTTT TAAGCAGAGT
AAAATCTGGG GTATGCTATA TGATTTCCAG CGAGATGCAG TGCTTGCCAT CATCAACAAG
CTGGAGAAGT ACAATGGCTG CATCCTTGCT GACAGCGTCG GTCTTGGTAA GACCTTCACT
GCGCTGGCTG TTATCAAATA TTACGAGAAC AGGAATAAGA CTGTTCTTGT CCTTTGCCCG
AAGAAGCTAT GCGAGAACTG GAATACATAT AAGGATAACT ACGTAAACAA TCCAATAGCA
TCAGATCGCC TGAATTATGA TGTTCTGTTC CATACGGACT TATCAAGGAA TGGCGGCACT
TCAAATGGCC TTGATCTTGA TCGCTTGAAC TGGGGTAACT ACGATCTTGT GGTCATCGAC
GAGTCCCACA ACTTTAGGAA TGGCGCAGGT ACCCATGCCA ACACGCAGGA GAACCGCTAT
GTGAAATTGA TGGACAAGGT GATCCGTGCT GGCGTCAAGA CGAAAGTGTT GATGCTGTCA
GCGACACCGG TCAACAACAG ATTCACCGAC CTGAAAAATC AGCTGGCCAT CGCCTATGAG
GGGAACTCGG AATTTATCAA TGAGAAGCTC GATACCAAAA AGCCGATTGA TGAGATATTC
CGTCAGGCGC AGAAAGCCTT CAATGCATGG AGCAAGCTCG ATCCGGAAGC AAGAACGACG
GACGCGCTGC TTAGGACACT GGATTTCGAT TTCTTTGAAG TCCTCGATAG CGTGACGATT
GCCCGCTCCA GAAAGCACAT AGAGAAATAT TACAACACGG AAGAAATCGG CAAATTCCCG
CAACGCCTGA AGCCTATCTC AAGGCGTCCG AGCATGACCG ATCTTTCGAG CGCCATAAAC
TATAACCAGA TTTACGAGCA GTTGATGCAG CTGACGCTCG TGATCTATAC TCCGTCAAAC
TATATCTTTC CGAGCAAGAT GTCGAAGTAC ATCGACCTCA CGCACAACAA AGGAAATAAC
CTTACGCAGA AAGGCCGTGA GCAAGGCATC CAGCGTTTGA TGAGTATCAA TCTCCTGAAG
CGTCTGGAGA GCTCTGTTTA TTCCTTCAAT TTGACATTGA GCAGAATTCT GGCGCTGATA
AAGAGCACCA TCTCAGCCAT TGACAGCTTT GAGAAAAACG GAAAAGCTGA TCTGGATATG
TATGAGGCTT CTGACAGCGA TTTTGATATT GATGACGAGA ATAACGATTA CTTCACCGTC
GGCAAAAAGG TAAAGATTGA CCTTGCTGAT ATGGACTATA AAACATGGCG TGATGAGCTG
CAGCGCGATG CGGATACGCT TGAGCTGCTG ACGCTTATGA TAGCAGACGT CACACCGGAG
CATGACCTGA AGCTGCAGAC CTTGCTTCAT CTTCTGGATG ACAAAATGAA GCATCCTATC
AATGAGGGCA ACAAGAAGGT GCTGATCTTC TCCGCGTTCT CCGATACGGC AGAGTATCTG
TACGATCAGG TGTCTGCCTA CATGAAATCA AACTATGGTC TGGATACAGC GGTTATTACT
GGAAGCATTG ACGGACGGAC TACCATCAAA GGCCTGAAAG CCACGCTCAA TAATGTGCTG
ACCTGCTTCT CGCCTATATC AAAGAGCCGT GATGTTCTGA TGCCGGGCAG TACAAAGGAA
ATTGATGTCC TGATTGCTAC GGACTGTATT TCCGAAGGTC AAAACCTGCA AGACTGCGAT
TATCTGGTGA ACTATGACAT TCACTGGAAT CCGGTGCGCA TCATCCAGCG CTTCGGTCGA
ATTGACCGTA TCGGCAGCAG GAACCTGTAT ATTCAGCTGG TGAACTTCTG GCCGGACATG
ACGCTGGACG ATTACATCAA CCTTAAATCT CGCGTGGAGA CCAGAATGAA AATCTCCGTT
ATGACCTCGA CCGGAGACGA TGACCTGATC AATCCAGAGG AAAAAGGCGA CCTCGAATAC
AGAAAGCAGC AGCTGAAGCG TCTGCAGGAA GAGGTCGTGG ATATTGAAGA TATGTCCACG
GGTATTTCCA TCATGGATCT GGGACTAAAT GAGTTCCGGC TTGACCTGCT GGAATATATA
AAGACGCATG ACCTTAGTAC TAAGCCGAAG GGACTGCACG CGGTAGTTCC GGCCACGGAG
GAGAATCCGG AGGGCGTGAT CTTTGTCCTA CGGAACATCA ATAACAGTAT CAACATTGAT
AACCAGAATC GCATTCACCC GTTCTACATG GTGTATATCG GTGTAGACGG AGAAATTGTC
TGCGACTACT TGAATCCGAA GAAGCTGCTG GACACCGTCC GGTTGCTGTG CCGAGGAAAG
TCTGAACCGA TTTTGACACT GTGCGAGAAA TTCAACAAGG AAACTGATGA TGGAAGGAAC
ATGGAGGAAG TGTCGCAGCT TCTCTCCGAT GCGATAAATT CCATTATTGA TGTAAAAGAA
GAAAGCGATA TTGACAGCCT GTTCTCCGCT GGCGGGACTT CTGCCCTGAT GTCGGAGATC
AACGGGCTGG ATGACTTTGA GCTTATTTGC TTCTTAGTAG TGAAATGA
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| Protein sequence | MKIFDNVTDI VRDDLKQTVK RGSKVSIAAA CFSMYAYKEL KAQLEQVDEF RFIFTSPTFI
KEKAEKQKRE FYIPRLSRES SLYGTEFEIK LRNEMTQKAI AKECADWIRR KATFKSNVTG
ENMGGFMTVA APAEEVAYMP MNGFTTVDIG CERGNNSYNM VNRMEAPFST QYMQLFESLW
NDKDKMQDVT DVIISNISTA YNENSPEFIY FMTLYNVFSE FLDDISEDVL PNEATGFKQS
KIWGMLYDFQ RDAVLAIINK LEKYNGCILA DSVGLGKTFT ALAVIKYYEN RNKTVLVLCP
KKLCENWNTY KDNYVNNPIA SDRLNYDVLF HTDLSRNGGT SNGLDLDRLN WGNYDLVVID
ESHNFRNGAG THANTQENRY VKLMDKVIRA GVKTKVLMLS ATPVNNRFTD LKNQLAIAYE
GNSEFINEKL DTKKPIDEIF RQAQKAFNAW SKLDPEARTT DALLRTLDFD FFEVLDSVTI
ARSRKHIEKY YNTEEIGKFP QRLKPISRRP SMTDLSSAIN YNQIYEQLMQ LTLVIYTPSN
YIFPSKMSKY IDLTHNKGNN LTQKGREQGI QRLMSINLLK RLESSVYSFN LTLSRILALI
KSTISAIDSF EKNGKADLDM YEASDSDFDI DDENNDYFTV GKKVKIDLAD MDYKTWRDEL
QRDADTLELL TLMIADVTPE HDLKLQTLLH LLDDKMKHPI NEGNKKVLIF SAFSDTAEYL
YDQVSAYMKS NYGLDTAVIT GSIDGRTTIK GLKATLNNVL TCFSPISKSR DVLMPGSTKE
IDVLIATDCI SEGQNLQDCD YLVNYDIHWN PVRIIQRFGR IDRIGSRNLY IQLVNFWPDM
TLDDYINLKS RVETRMKISV MTSTGDDDLI NPEEKGDLEY RKQQLKRLQE EVVDIEDMST
GISIMDLGLN EFRLDLLEYI KTHDLSTKPK GLHAVVPATE ENPEGVIFVL RNINNSINID
NQNRIHPFYM VYIGVDGEIV CDYLNPKKLL DTVRLLCRGK SEPILTLCEK FNKETDDGRN
MEEVSQLLSD AINSIIDVKE ESDIDSLFSA GGTSALMSEI NGLDDFELIC FLVVK
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