Gene DET1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1096 
Symbol 
ID3229608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp996743 
End bp998089 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content54% 
IMG OID637120660 
ProductSNF2 domain-containing protein 
Protein accessionYP_181811 
Protein GI57234142 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.291747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTCA CGCCACATGA TTATCAGGAC TATGCCATCC GCTACATCGA AAAGCATCCC 
GTGGCCGCTG TCCTTTTAGA TATGGGACTT GGCAAAACGG TGATCTCCCT GACTGCTGTA
TATGATCTCT TGTTTGACAG CTTCGAGGTA CGGCGCGTTC TGGTGGTCGC TCCCTTACGA
GTCGCCCGTG ATACTTGGCC TTCGGAAATC CAGAAATGGA GTCACCTTGC GGGTCTAACC
TTTTCGGTCG CAGTCGGGAC TGCCAAGGAG CGAAAAGCAG CACTTATGCA GCAAGCGGAC
ATCACGATCA TCAACCGCGA AAACCTGCAG TGGCTCATTG ACGAGTCCGG CTTTCCCTTT
GACTACGATA TGGTGATTAT CGACGAGCTA TCGTCCTTCA AAAACCACAA GTCAAAGCGC
TTCAAGTCTC TGATGAAGGT TAGACCCAGA CTCCATCGCA TTATCGGCCT CACCGGCACA
CCTTCCTCCA ACGGTCTCAT GGATCTGTGG GCAGAGTTCA AAGTGCTGGA TATGGGTGAG
CGCCTCGGAC GCTTCATCAC ACAATACCGG ACAAATTACT TCATGCCGGA CAAGCGAAAC
GGCGAGATCA TCTACTCCTA CAAGCCGCTG CTCTATGCGG AGGACGCGAT TTACCGGAAA
ATCTCGGATA TCACGATTTC CATGAAATCG ACCGACCACT TAAAGATGCC GGAGCTGGTA
TCCACGGCCT ATGAGGTGCA GCTTTCGGAA TCGGAGCGTG ACCGCTACGA GGATTTGAAG
CAGGAGTTCA TCCTGCAGCT CCCAGACGGC GAAGTCACCG CTGCCAATGC AGCATCCCTC
ACCGGGAAGC TCTCCCAGCT GGCCAATGGT GCGATTTATG CGGATACCGG AGAAATCATC
GAGTTTCACG ACAGAAAGCT GGACGCTTTG GAGGATATTA TCGAGGCCGC CAATGAAAAA
CCGCTCCTTG TAGCCTACTG GTTCCGGCAC GACTTATCCC GCATAAAGAA CCGCTTCAAT
GTTCGGGAGA TCAAGACAAG CCGCGATATC GCTGACTGGA ATGCGGGAAA GATTCCTGTA
GCAGTCATAC ATCCGGCCTC TGCCGGTCAT GGCCTAAACC TTCAGGCCGG AGGCTCCACC
CTTGTATGGT TCGGGCTCAC ATGGTCGCTG GAACTCTACC AGCAGACCAA CGCCCGCCTC
TGGAGGCAAG GCCAAGAGTC CCATACCGTG GTGATCCAGC ACATCATCAC AAAGGGCACC
ATTGATGAGC GGATCATGCG GGCACTCACC AAGAAAGAAC TGACACAGTC GGCACTGATC
GACGCGGTCA AAGCCGAGGT GGTGTGA
 
Protein sequence
MNFTPHDYQD YAIRYIEKHP VAAVLLDMGL GKTVISLTAV YDLLFDSFEV RRVLVVAPLR 
VARDTWPSEI QKWSHLAGLT FSVAVGTAKE RKAALMQQAD ITIINRENLQ WLIDESGFPF
DYDMVIIDEL SSFKNHKSKR FKSLMKVRPR LHRIIGLTGT PSSNGLMDLW AEFKVLDMGE
RLGRFITQYR TNYFMPDKRN GEIIYSYKPL LYAEDAIYRK ISDITISMKS TDHLKMPELV
STAYEVQLSE SERDRYEDLK QEFILQLPDG EVTAANAASL TGKLSQLANG AIYADTGEII
EFHDRKLDAL EDIIEAANEK PLLVAYWFRH DLSRIKNRFN VREIKTSRDI ADWNAGKIPV
AVIHPASAGH GLNLQAGGST LVWFGLTWSL ELYQQTNARL WRQGQESHTV VIQHIITKGT
IDERIMRALT KKELTQSALI DAVKAEVV