| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1085 |
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| Symbol | |
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| ID | 3229626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 986530 |
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| End bp | 987747 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637120649 |
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| Product | HK97 family major capsid protein |
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| Protein accession | YP_181800 |
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| Protein GI | 57234159 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAGA TTATGGAACT CATGGAAAAG AGAGCGAAGG CATGGGAGGC TGCAAAGGCT
TTTCTTAACA CCCACTCTCA GAACGGCGGC ATGGTTTCTG CGGAGGATGC CGCAACCTAT
GACAAGATGG AGAAGGAAGT CACCGACCTC ACCCACGATA TCGAGCGCCT GCAGCGTCAG
GAGCAGATCG ACAAGATGAT GAGCGCACCG ACCTCTGCTC CCCTTACCGG AAAGCCCGGT
GCCAAGGATG AGCCGGAGGA TAAGCCCGGC ATCGCTTCCA AGGCATACCG CTCCGCCTTC
TGGAACAACA TCCGCAAGCG CAACTACTAC GATGTCCAGA ACGTGCTGGA GGTCGGCACC
GATGCCAACG GCGGATATCT CGTCCCGGAC GAGTACGAAA AGCAGCTGAT CGACGCGCTT
CAGGAGGAGA ACTTCTTCCG TTCCCTCGCT ACGGTCATTC AGACCCAGTC CGGCACCCAC
ACCATTCCGG TCGTCGCCTC TCACGGCACT GCCGCTTGGA TGGATGAGAA CGGCCTGTAC
CCTGAATCCG ACGATACCTT CGACCAGATC AGCCTTTCCG CTTACAAGCT GGGCACGGCG
ATCAAGGTTT CCGAGGAGCT GATGAACGAC TCCGTTTTCG ACCTCGAAAA GTACATCTCC
ACCGAGTTTG CACGCAGGAT CGGTGCTGCC GAGGAGGAGG CTTTCCTGAT CGGCGACGGC
AACAAAAAGC CCGAAGGCGT GTTCACCAAG GTGGCAGCCA CTACCGGCGC GACCACAGAG
ATCAACAATG CCACGGTGTC CTTCGACGAC ATCATGGACG TGTTCCATTC GCTCCGCAGC
GTCTACAGGA ACAAGGCCAT CTGGATCTTG AACGATACCA CCATCAAGGC GCTCAGGAAG
ATCAAGGACA ACAACGGGAA CTACATCTGG CAGCCCTCTG TTGTGGCTGG CCAGCCCGAC
ACCATCTTGA ACCGTCCTTA CAAGACCAGC ATCTACGCGC CGGAGCTTGC TGCGGGCAAT
ACCGCGATCC TCTTTGGCGA CTTCAGCTTC TACTGGATCG CTGACCGTCA GGGACGCTCC
TTCAAGCGCC TCTCCGAGCT CTATGCGGCA AACGGCCAGA TTGGCTTCCT TGCTTCCGAG
CGCGTGGACG GCAAGCTCAT CCTTCCGGAG GCTGTAAAGG GTCTGTCCGT CAAGGCGGCC
TCTTCTTCGA GAGGATAA
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| Protein sequence | MTQIMELMEK RAKAWEAAKA FLNTHSQNGG MVSAEDAATY DKMEKEVTDL THDIERLQRQ
EQIDKMMSAP TSAPLTGKPG AKDEPEDKPG IASKAYRSAF WNNIRKRNYY DVQNVLEVGT
DANGGYLVPD EYEKQLIDAL QEENFFRSLA TVIQTQSGTH TIPVVASHGT AAWMDENGLY
PESDDTFDQI SLSAYKLGTA IKVSEELMND SVFDLEKYIS TEFARRIGAA EEEAFLIGDG
NKKPEGVFTK VAATTGATTE INNATVSFDD IMDVFHSLRS VYRNKAIWIL NDTTIKALRK
IKDNNGNYIW QPSVVAGQPD TILNRPYKTS IYAPELAAGN TAILFGDFSF YWIADRQGRS
FKRLSELYAA NGQIGFLASE RVDGKLILPE AVKGLSVKAA SSSRG
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