| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1067 |
|---|
| Symbol | |
|---|
| ID | 3229660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 969361 |
|---|
| End bp | 970917 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637120631 |
|---|
| Product | phage integrase family site specific recombinase |
|---|
| Protein accession | YP_181782 |
|---|
| Protein GI | 57234193 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.194572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCATCC CGGCCAAAAG GCAGGTCGGG AACACGGTAA AACAATCCGA GCAGAAAAAG
CTCCGCGTCG CAGCCTATTG CCGAGTCAGC ACGGATTCCG ACGAACAGGA AAGCAGCTAT
GAGGCGCAGG TCACGCATTA CACGGAGTAC ATCCAGAAGA ATCCCGACTG GGAACTGGCA
GGCATATTTG CGGACGATGG CATATCCGGT ACCAACACCA AAAAGCGTGA CGAGTTCAAC
CGCATGATTG ACGAGTGCAT GTCCGGAAAC ATTGACATGA TCATCACCAA GTCCATCAGC
CGATTTGCCC GAAACACTCT CGACTGCCTC CAATACATCC GGCAGCTCAA GGACAAGAAC
ATTCCGGTCT ATTTCGAGAA GGAATCCATA AACACGCTGG ATGCCAAAGG CGAGGTGCTC
CTTACGATCA TGGCGAGCCT TGCTCAGCAG GAAAGCCAAT CAATGAGCGA GAACATAAAG
CTCGGCCTTC AATACCGCTA TCAGCAGGGC AAGGTTCAGG TTAACCACAA CCGCTTCCTC
GGCTATACCA AGGATGAGAA CGGCAACCTT GTCATTGATC CGGAACAGGC CGAGATCGTA
AAACGCATCT ACCGGGAATA CCTCGAAGGC TCCAGCATGG ACAAGATTGC TTCCGGTCTT
ATGGCTGACG GCATTTTAAC CGGTGCAGGA AAAGAAAAAT GGCACACAAG CACCATCAAC
AAGATTCTCC GAAACGAGAA GTATATGGGT GACGCGCTGC TTCAAAAGAC CTACACCACA
GACTTCCTGA CGAAGAAGCG CATCAAGAAC AACGGCACCG TACCTCAATA CTACGTTGAA
GGCGACCACG AAGCGATCAT TCCAAAAGAC CTCTTCATGC AGGTGCAGGC GGAGCTTGTC
CGTCGCCGAG TAGTCCACGT CAGCCCGACA GGCAAGAAAC GCAGCTTCTC CTGCAATCAC
TGTTTTGCAC AGATGGTTTT CTGCGGAGAC TGCGGCGAGC TTTACCGGCG CGTTCACTGG
AATAACCACG GCTGCAAGTC CATCGTCTGG CGCTGCATCA GCCGATTGGA GCCGGGCTCC
GCAGACACAA ACTGCACCAA CCGGACGGTT AACGAGCTCC TGCTGCAGGA AGTCACGGTC
ACAGTCATCA ATCAGATTCT GACAGAGCGC GGCACCTTTC TAAAACAGTT GCAGGCCAAT
ATCGCCAAGG CCGTAGTCAG CGCCGATACC CTATCGCCGG ATGGCATTCA AGCTCGGCTG
GAAGAACTGC AAAAAGAGCT CATCAAGAAG GCAAACAACA AACAGGATTA CGATGCCATC
GCTGACGAAA TCCTCAGACT CAGGGAACAG AAGGAACAGT CCGAGGTCGA CAGCCACCAC
CGGGAAGAAG CCATGAACCG GATCAAGGAA CTGCAGGACT TTATCTTCAA GCAGAAAACA
GACATCACAG AGTTCGACGA AGCTCTGGTA AAAAAGCTCA TCGAGAAGAT CACCGTCTTT
GCCGACCACT TCACTGTGGA ATTCAAGTCC GGGATCACAA TTGATATAGA GGCATAA
|
|---|
| Protein sequence | MVIPAKRQVG NTVKQSEQKK LRVAAYCRVS TDSDEQESSY EAQVTHYTEY IQKNPDWELA
GIFADDGISG TNTKKRDEFN RMIDECMSGN IDMIITKSIS RFARNTLDCL QYIRQLKDKN
IPVYFEKESI NTLDAKGEVL LTIMASLAQQ ESQSMSENIK LGLQYRYQQG KVQVNHNRFL
GYTKDENGNL VIDPEQAEIV KRIYREYLEG SSMDKIASGL MADGILTGAG KEKWHTSTIN
KILRNEKYMG DALLQKTYTT DFLTKKRIKN NGTVPQYYVE GDHEAIIPKD LFMQVQAELV
RRRVVHVSPT GKKRSFSCNH CFAQMVFCGD CGELYRRVHW NNHGCKSIVW RCISRLEPGS
ADTNCTNRTV NELLLQEVTV TVINQILTER GTFLKQLQAN IAKAVVSADT LSPDGIQARL
EELQKELIKK ANNKQDYDAI ADEILRLREQ KEQSEVDSHH REEAMNRIKE LQDFIFKQKT
DITEFDEALV KKLIEKITVF ADHFTVEFKS GITIDIEA
|
|---|
| |