Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1052 |
Symbol | |
ID | 3229647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 952236 |
End bp | 952613 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637120616 |
Product | endoribonuclease L-PSP, putative |
Protein accession | YP_181767 |
Protein GI | 57234180 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0968171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAA AATATTTTTC AGCACCCGGT GCCCAGGGTC CCTATTCACT GGCGGTAAGG GCGGGAGATT ACCTGTATAT TTCCGGCCAG ATAGGCCACA CAGATATAGA GGGCAAACCT CTGGCTGGGG TGGAAGCCCA GACCAAACGC TGTCTGGAAA AGATGGCTGA GCTACTTAAA GAGGCGGGTG CTTCTTTTGA TGATGTGGTA AAGACTACCG TATTTTTGAA GAGCCAGGAA GACTTTGCCA AGATGAACAG TGTTTACACG ACCTTTTTCA GTGCGCCCAA ACCTGCCCGC TCAACTGTCA TTGCCGGTAT GGTTTTTCCG GAAATAGTGG TGGAAATAGA AGCAGTTGCC TATCTGCCTG GGGTATAA
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Protein sequence | MTKKYFSAPG AQGPYSLAVR AGDYLYISGQ IGHTDIEGKP LAGVEAQTKR CLEKMAELLK EAGASFDDVV KTTVFLKSQE DFAKMNSVYT TFFSAPKPAR STVIAGMVFP EIVVEIEAVA YLPGV
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