Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1046 |
Symbol | rpsF |
ID | 3229652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 949837 |
End bp | 950166 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637120610 |
Product | 30S ribosomal protein S6 |
Protein accession | YP_181762 |
Protein GI | 57234185 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0360] Ribosomal protein S6 |
TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000381184 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCAA GCGAGCTACT TAAATCCAGA GTTGAAAACC TGCGTGATTA CGAACTGGTG GTTATTTTAA CCACTGACAC CCCCAAAGAA AAGGTTGAGG CCATTCTGGA AGGCATTAGT AAGACCATAG CTGAAAAAGA TGGCAGCTTT ACCGAAGTGA ATCACTGGGG TAAACGTAAG CTGGCTTATC TTATCGGCAG ATATGGCGAG GGTTATTACG TGTTTATCAA GATGAAGGCC AAGCCTTCTT CCATACGCAA GATAAACGCT GATTTGCGTA TTTCAGAGCA GGTTATCCGC CATATGGCCA TTAATATGGA CGAAGAGTAA
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Protein sequence | MAASELLKSR VENLRDYELV VILTTDTPKE KVEAILEGIS KTIAEKDGSF TEVNHWGKRK LAYLIGRYGE GYYVFIKMKA KPSSIRKINA DLRISEQVIR HMAINMDEE
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