Gene DET1041 details

Gene Information

• Locus tag: DET1041
• ID: 3229666
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: -
• Start bp: 946995
• End bp: 948110
• Gene Length: 1116 bp
• Protein Length: 371 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637120605
• Product: PQQ repeat-containing protein
• Protein accession: YP_181757
• Protein GI: 57234199
• COG category: [S] Function unknown
• COG ID: [COG1520] FOG: WD40-like repeat

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.331576
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTTCAAAA CCAATCGCAT ACCCAAAAAA GTTATTTTGC TGTTTAGCCT TATCGGCATT 
CTAGTTGTTT TAAGCGGCTG TATAGGTTCC GGACAGAAAC CTTTAGGCTG GTCAGGCATA 
CTTATCTCTG ATAATGATGC CATTTTTGGT TCTATGACTG GCAAACTTAT AGCTCTTAAC 
AAGGATGCCA GCACTCCCCG GTATCAAATA TCACTTGAGA CCACTACCAA TGGCGGCGGC 
TGTGCCGGTG CTGTTACTAC TGTAGGTATA TACGGTACAC CGGTAGTCTC TGACGGGGTT 
ATTTACGTTT CAACCTACGG CGGCAAAGTT TATGCCTACA ATCAGGCTGA CGGCAGTCTG 
AAATGGGTTT ACCCCGGAAC CGGGTCAGTA TCTGCCATTG TCAGCGGTAT TGCTCCTAAC 
GGAGATAAAA TCTTTTTTGC GGATACTAAC GGGGTTGTTT ACGCCCTGAG CAAGGCAGAC 
GGTCAAAAGG TTTGGGAATA TCAGACCGGT GCCAAGATTT GGGCTTCACC GGCTGTTGCC 
GGAGATCTGG TAATAGTCCC CGGGTTTGAC AAGAAAGTAT ATGCCCTGGA TATCAACACC 
GGCAGCCCTG TTTGGACTTT TGAAACCCAA AGCCCCTTTG CCAGCGCCCC GGTAGTTGAT 
AACGGCGTTG TTTATGTGGG CTGTTTTGAC CGCAATCTGT ACGCCCTGGA TTTGGAAGAT 
GGCAGCCAGA AATGGGTCTT TGAATCACCC AACTGGTTCT GGGCGACCCC GGTTGTGGCT 
GACGGCAAAG TTTTTGCCCC CAATCTGGAC GGCAACACCT ATGTACTTGA TGCTTTGACT 
GGTTCTCAGA TTAAAGTAAT TGATATGACT GACGAGGTGG CTTCTTCCCC GGCCCTGCTG 
GGTGACAATG TGATTGTAGC CACTAAGACC GGCAAGATTT TTTCCATAAA TGTATCTTCA 
ATGGAAATGA AGGCTGTTAC CGACCTTGCC TTGAAAGTGA TTGCACCGGT TACGGTGTCA 
GGTGAAGTTG TATACATACA TACCCAGGAA GATGAAACTG TCTATGCTAT AAATCCGGAG 
AGCCGGACTA TAATCTGGAC TTTTGTAGTA AGTTAG 

 

Protein sequence

MFKTNRIPKK VILLFSLIGI LVVLSGCIGS GQKPLGWSGI LISDNDAIFG SMTGKLIALN 
KDASTPRYQI SLETTTNGGG CAGAVTTVGI YGTPVVSDGV IYVSTYGGKV YAYNQADGSL 
KWVYPGTGSV SAIVSGIAPN GDKIFFADTN GVVYALSKAD GQKVWEYQTG AKIWASPAVA 
GDLVIVPGFD KKVYALDINT GSPVWTFETQ SPFASAPVVD NGVVYVGCFD RNLYALDLED 
GSQKWVFESP NWFWATPVVA DGKVFAPNLD GNTYVLDALT GSQIKVIDMT DEVASSPALL 
GDNVIVATKT GKIFSINVSS MEMKAVTDLA LKVIAPVTVS GEVVYIHTQE DETVYAINPE 
SRTIIWTFVV S