Gene DET1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1039 
Symbol 
ID3229668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp945444 
End bp946124 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content51% 
IMG OID637120603 
ProductSpoIIIJ-associated protein Jag, putative 
Protein accessionYP_181755 
Protein GI57234201 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00710769 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGG TCGAGACGAG CGCCAAGACG GTGGAGGAAG CAATAAAGCT GGGTCTAAAT 
CAGCTAAACG TAAGCCGAGA CGAGGTTGAG GTAGAGGTTC TGTCTGAAGG CCGGCATGGT 
TTGCTGGGCT TGCGGGGCGA AGATGCCAGG GTATGCCTGC ATCTTCTTGA AAATGAATAT 
GATGACGATA TTGCGCCGGG CAACCAGATG GATGCCGGTG ACCTGGCTCA GAGTATCCTT 
GAAACTCTGC TGGACAAGAT GGATATTGAG GCCTATGTAG ATATCCTGCC GGAAAAAATG 
GTTACCGATG AAGAATCCCA GCCGAGTACT GTTTTGAACA TTGTGGGCGA AGACCTGGGT 
ATACTTATCG GGCGCAAGGG GCAAACCCTG ATAAGCTTAC AGCAGATAAT CAGGCTGATG 
CTGTCTCACC AGCTGGGCAG GTTTGAACCG GTGGTGGTTG ACGTAAACGG TTACCGGCAG 
CGGCGGCTTA GCTCCCTTCA GTCTCTGGCC TGGAGGACTG CTGAACAGGT TAAGCTTAGG 
CATATGCCTT TTTCACTGGA ACCCATGCCA GCTTATGAGA GGCGGATTAT CCACCTGGCG 
CTGGCTGGTG ATGACGAAGT AACTACCCAG AGCGTTGGCT TTGGTGAATC AAGAAAAGTT 
GTGGTAGTCT TAAAAGAATA G
 
Protein sequence
MKKVETSAKT VEEAIKLGLN QLNVSRDEVE VEVLSEGRHG LLGLRGEDAR VCLHLLENEY 
DDDIAPGNQM DAGDLAQSIL ETLLDKMDIE AYVDILPEKM VTDEESQPST VLNIVGEDLG 
ILIGRKGQTL ISLQQIIRLM LSHQLGRFEP VVVDVNGYRQ RRLSSLQSLA WRTAEQVKLR 
HMPFSLEPMP AYERRIIHLA LAGDDEVTTQ SVGFGESRKV VVVLKE