Gene DET1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1025 
Symbolrnc 
ID3229696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp931014 
End bp931727 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content48% 
IMG OID637120589 
Productribonuclease III 
Protein accessionYP_181741 
Protein GI57234229 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00427221 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGATT TAACTGAACT TGAAAAATCC CTGGGAGTAA AGTTTGAAAA TCTGTCCCTT 
TTGGAGCAGG CGCTCATACA TACTTCATGG GTAAACGAAA ACCCAAACCA CTTAAGCGGC
TCTAACGAAA GAATGGAATT TCTGGGTGAT GCCGTACTGG GTGTAATATT TGCAGACCGG
CTTTACCATG ATTTCCCTGA TATTCAGGAA GGTGACCTGA CCCGTTTCCG TTCCCTGCTG
GTGCGGCGGG AAAGTCTGGT AAGAGTAGCT TTGGGCATCA ATCTTGGCAA ATACCTCTAT
CTGGGGCGGG GTGAAGATGC CTCCAAGGGG CGTTTTAAGC CGGCCAATCT GGCGGGTGCA
TTTGAAGCCG TGCTGGCAGC CATATATCTG GATAAAGGGA TAGATGCAAC CAGGGAAGTT
ATCTTCCGCC TTTTTAAGAC CGAAATGGAA CGGGTGCAAA CCCTGAGTTC CAACATTGAT
TACAAATCAC GCCTGCAGGA GCTTGTGCAA GCCCAATTTC AGCTTACACC CCGCTACCGT
ATTATAGATT TCAGCGGGCC GGAACATAAC CATCTGTTTA TAGCCGAAGT CTATACCGAA
GACAAAGTGC TGGCGGAAGG TTCGGGGCGC AGCAAAAAAG AAGCCGAAAC CAGCGCCGCT
AAAGAAGCCT TGCAGCAGTT TGAAAACAGC TTTACAGCCG AAGATAACAT TTGA
 
Protein sequence
MLDLTELEKS LGVKFENLSL LEQALIHTSW VNENPNHLSG SNERMEFLGD AVLGVIFADR 
LYHDFPDIQE GDLTRFRSLL VRRESLVRVA LGINLGKYLY LGRGEDASKG RFKPANLAGA
FEAVLAAIYL DKGIDATREV IFRLFKTEME RVQTLSSNID YKSRLQELVQ AQFQLTPRYR
IIDFSGPEHN HLFIAEVYTE DKVLAEGSGR SKKEAETSAA KEALQQFENS FTAEDNI