| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1016 |
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| Symbol | |
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| ID | 3229701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 923278 |
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| End bp | 927054 |
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| Gene Length | 3777 bp |
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| Protein Length | 1258 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637120580 |
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| Product | sensory box sensor histidine kinase/response regulator |
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| Protein accession | YP_181736 |
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| Protein GI | 57234234 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA AAAGGCCGAA TCCGGAAGTT TCAGAACTGC GATATCGCCG CCTTTTCGAA
ACGGCTCAAG ACGGTATTCT CATTATTGAT GCCGAATCCG GCAAAATAAC TGATGCCAAC
CCCTTTTTGT TCGAGATGCT GGGTTATGAT ACAGACGCTA TTATCGGTAA AAAACTCTGG
GAAATTGGTC TATTCCATCA TATAGTTTCC AACCGCAAGG CATTTGAAGT TCTGCAGGCT
AAAAGCGGTA TTCGCCACGA AGACGTATAC CTTGAGACAA AAAGCGGCCA AATACGCCAG
GCGGAATTTA CCAGCAATAC CTATTATGTC GGTGAGGATA AAATCCTCCA GTGCAATATA
CGGGATATTA CCGAGCGCAA GCTGGCAGAA GAAGAGCTGC GCAAAACTGA AGAACGTTAC
CGGGAGTTCT ACCAGAAATC CCCCATCGGT TACCAGTCAC TGGATTCCGA AGGCCGTCTG
ATAGAGGTCA ATCAGGTCTG GCTGGATGAA ATGGGATACA CCAAAGAAGA AGTTGCCGGC
CGCTGGTTCG GTGATTTTTT GCGGCCTGAC CAGATAGACC TTTTCAAGAA ACGCTTTGCT
GTTTTCAAAA ATACTGGTAC TGCCGCTACC GAATTTTATA TGAACCGCAA AGACGGGTCA
GTGGTGCTGA TAGCATTCAG CGGGAAAATA GCCCGTGATA CTAAGGGTAA TTTTAAACAA
ACCCATTGCA CATTGCAGGA TATTACCCAG AGGCATTTGG CAGAAGAAGC TATCAGGGAA
AGCCAGCGGA AATATCAGGC CCTTTTTGAA AGCATAGGTG ATGCGGCTTT TGTCTGTTAT
ATTGATGACC ATAAGTGGGC GGATGAGTTT ATTGAACTGA ATAAAGTGGC TTCGGATATG
CTCGGCTATA CCCATGAACA GCTCTTGTCA ATGTCAGTAA AGGAGCTGTT TTTTAGTTTG
CCGTCAGACC TTATCTTGGA AGAGACCACC GATAAGCTTT ACCGTCATAA GGTAATAACC
CGTGAGTCCA GACTGCGGCA CAAATGCGGT CAGGCTATTC CGGTGGAAAT GACATTCCAT
TTATTTGACT TGCAGGGCAA GCCGGCGGTG CTTACTCTGG CCCGGGATAT AACCAGCCGT
AAAGAGGCCG CCCGTGAACT TGAGCAAAGT CATAGCCGTT TGGTAAAAGC CGAACAGGTA
GCCGGATTCG GTTATTGGGA ATTTGATTTA GCCAATGGGC TGGTATATCC CTCTGCCGGT
GCCAGAGAAA TATATGGCTT AGAGAGCGAG AGTATCACTA TTCCTTTTGT CCAGCAGATA
CCTCTTTCCG AATACAGGTC TGACCTGGAT AAAGCCATGA ATGACCTGAT AAAGCATAAT
ATCCCGTATG ATATTGAGTT TAAAATAAAA CGGCCTACCG ACGGAGCTGT TTTGTATGTA
CACTCTATAG CAGAGTATGA TGCCAAGCGG AATTTGGTGT TCGGTACAAT TCAGGATATT
ACCAAGAGAA AGCAGGCCGA AGAATTACTC CGTGAAAGCG AAGCCAGATT CCGTTCAACT
TTTGACCAGT CTCCTATAGG TGCTGCCATA TATGATTTGG GCTTCAAATA CCGGCAGGTC
AATGATAAAT TCTGCAAAAT GTTAGATTAT TCTGATGACG AGCTGACTAA TCTGTCAGTC
AGGGATATTA CCCACCCGGA TGATTGGCCT AAAGATTTAA TTCATCTGAA TCAGCTGAAA
AACAGGGAAA TCAGCCGTTA TGAAACGGAT AAGAGATATA TTCACAAAAG CGGCAGTGTA
TTCTGGGTGC ATCTGTCCGT GGCCGGTATC CGGGATGCCG GAGGGAATCT GCTTTACTAT
CTGGCTATGA TTGTAGATAT TACAGCCCGT AAAGAAGCCG AAGATGCCCT CCAGAAATAC
AAACTGATTG CCGAAGACAG CCGGGATATT ATCCTGTTCC TGGACAGGCA AACCGGGCGA
TTGCTGGAAG CTAATACCGC GGCTGTAAAG TCCTACGGAT ATAGCCGTAA ACAGCTTTTG
TCAATGAGAA TACAAGATTT GCGTGCCCCG CAAGCCAGGA TACTTAGTGA CTCTGAGTTT
GAGCAAGCCT ATGCTCATGG CATGCTTTTT GAAACCATGC ACCGCCGTAA AGACGGCAGC
ACTTTCCCGG TGGAAGTCAG CTCACGGGGA GCAGATATTG AAGGGACAAC CACCCTGATA
AATATTATCC GGGATACTAC AGAGCGCAAA CAGGCCGAAA AAGCCTTGAG CGAAAGCCTG
CAGAGTTATC AAGTGCTTTT TAATAGCGTT ACCGATGCCA TTCTGGTGTA TCAGCCGGAG
GCGGATTATT CCCCCGGCAA ATTTATAGAG ATGAATGATG CTGCGGTGGC TATGCTGGGG
TACAGCCGCC AGGAAATGCT GCAGATGAAC CCGCTGGATG TGGTTTCAAA AGGAATACCC
ACGGTTAATG TATTTACAGA TACCATGCGT CAGGCAGAAA AAAATTCTGA ACTGGTAGCT
GAGCAAACGC TAAAGACGAA ATCAGGTGAA ACCATACCGG TTGAACTGCA CTCGCGTATG
TTTGAGTTTG GGGGCAAGCA TACGGTTATT ACCCTTGCCA GGGATATAAG CGAACGCAAG
AGGCTGGAGG AAGAACAGAA AAAACTGCGT CACCAATCTG AAATGTCCAG CCGTCTGGCG
GCAATAGGCG AAATGGCCGC CGGAATTGCC CATGAGATAA ATAACCCTCT GACGGGGGTA
ATCGGTTTTG CTTCTATCCT TATGGATAGG GAAGATTTGC CGCCTGATGC TATGGAGCAG
CTGCAGATAA TCAATTCCGG CAGTCAAAGG GTAGTGGAGA TTGTAAAGCG GATGCTTACA
TTTGCCCGCC AATCCAAACC GGTCAGGAGC AGTATAAATA TTACCGAACT TATTGATAAT
ACTTTGGAAT TACGCAGTTA CGTGCTGAAA ACAGCCAACA TAGATGTAGT CAGGCATTAT
GAACCCGGGC TGCCGCTGCT GACTGTTGAT TCCGGCCAAA TCCAGCAGGT TATTCTGAAT
CTGATTCTAA ATGCCGAATA TTCCATGAAA AAAGCCCATG AAAAAGGCAC ACTGACTATT
ACCGTCAGCC GGACGGGGGA TAGAATCAGA ATGTCTTTCC GTGATAATGG TATGGGTATG
TCCGCCGAGA CACTGGGTAA ACTCTTTCAG CCATTCTTTA CCACCAAAGA GCCAGGTGAA
GGTTCGGGCT TGGGGCTCAG TTTGTCTCAC GGTATCATAC TGGAACATGA TGGCACTATC
CGGGGAGAAA GTATCCCCGG TGAAGGGGCT GAATTTATTG TGGAATTGCC CATAAAGCTT
TCCAATGAAA AATCTGCTAT CAGCAATCAG GATAGCATGG CTATAGAGCT AGCTAAAAAA
GCATCTATAC TGGCAGTTGA TGATGAGCCG GCTATCCGGT CACTGATACG GATTGTGCTT
ACCCAAGATG GCTATCAAGT AGATGAATGC GAAGCCCCCC AGGAAGCTAT GGAAATGATT
TCTAAAAATA AATATGATGC TATTCTTCTG GATATACGCA TGCCCGGCAT GAGCGGCCTG
GAGCTTTATT CAGCAATAAC CGCTAAATGG CCCAAGATGG CAAAACGGGT GATTTTTATT
ACCGGTGATA CCTCCGGCAA GCTTATGGTT GCCAATGATA TACCCTGTAT AAACAAGCCT
TTTAATATAG CAGTTTTGAA AGACACCCTG CTTAAGATAC TTTCACAGCC AAACTGA
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| Protein sequence | MNNKRPNPEV SELRYRRLFE TAQDGILIID AESGKITDAN PFLFEMLGYD TDAIIGKKLW
EIGLFHHIVS NRKAFEVLQA KSGIRHEDVY LETKSGQIRQ AEFTSNTYYV GEDKILQCNI
RDITERKLAE EELRKTEERY REFYQKSPIG YQSLDSEGRL IEVNQVWLDE MGYTKEEVAG
RWFGDFLRPD QIDLFKKRFA VFKNTGTAAT EFYMNRKDGS VVLIAFSGKI ARDTKGNFKQ
THCTLQDITQ RHLAEEAIRE SQRKYQALFE SIGDAAFVCY IDDHKWADEF IELNKVASDM
LGYTHEQLLS MSVKELFFSL PSDLILEETT DKLYRHKVIT RESRLRHKCG QAIPVEMTFH
LFDLQGKPAV LTLARDITSR KEAARELEQS HSRLVKAEQV AGFGYWEFDL ANGLVYPSAG
AREIYGLESE SITIPFVQQI PLSEYRSDLD KAMNDLIKHN IPYDIEFKIK RPTDGAVLYV
HSIAEYDAKR NLVFGTIQDI TKRKQAEELL RESEARFRST FDQSPIGAAI YDLGFKYRQV
NDKFCKMLDY SDDELTNLSV RDITHPDDWP KDLIHLNQLK NREISRYETD KRYIHKSGSV
FWVHLSVAGI RDAGGNLLYY LAMIVDITAR KEAEDALQKY KLIAEDSRDI ILFLDRQTGR
LLEANTAAVK SYGYSRKQLL SMRIQDLRAP QARILSDSEF EQAYAHGMLF ETMHRRKDGS
TFPVEVSSRG ADIEGTTTLI NIIRDTTERK QAEKALSESL QSYQVLFNSV TDAILVYQPE
ADYSPGKFIE MNDAAVAMLG YSRQEMLQMN PLDVVSKGIP TVNVFTDTMR QAEKNSELVA
EQTLKTKSGE TIPVELHSRM FEFGGKHTVI TLARDISERK RLEEEQKKLR HQSEMSSRLA
AIGEMAAGIA HEINNPLTGV IGFASILMDR EDLPPDAMEQ LQIINSGSQR VVEIVKRMLT
FARQSKPVRS SINITELIDN TLELRSYVLK TANIDVVRHY EPGLPLLTVD SGQIQQVILN
LILNAEYSMK KAHEKGTLTI TVSRTGDRIR MSFRDNGMGM SAETLGKLFQ PFFTTKEPGE
GSGLGLSLSH GIILEHDGTI RGESIPGEGA EFIVELPIKL SNEKSAISNQ DSMAIELAKK
ASILAVDDEP AIRSLIRIVL TQDGYQVDEC EAPQEAMEMI SKNKYDAILL DIRMPGMSGL
ELYSAITAKW PKMAKRVIFI TGDTSGKLMV ANDIPCINKP FNIAVLKDTL LKILSQPN
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