Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1008 |
Symbol | |
ID | 3229717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 918594 |
End bp | 919406 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637120572 |
Product | hypothetical protein |
Protein accession | YP_181728 |
Protein GI | 57234250 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.020658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGCA ATAACCCCAA TATATTCACC ATAAATGACC ACGAATTTAA CATAACCCAA AAAGGGCTTG ACCCCGAACA GGTTAAGGTA TTTATAGAAA AACTGCTTGA GGAAAACAGC CGCTATACGG CCGAACTTGC CAGAATGAAA GAGCAGGCTG AGCATCTGGA TTCCCTGAAG AAACTGGCAG ATGCCACGGT TATGGAGGCT GATAAGCTGG CGGCGAGGCT TAAAGAAGAG GCTGTGGCTA AAGCTAAAGC AGAGTCAGAC AGCCTGATTG CAAAGGCTGA GGAAAAAGCC AGGAAAGTGT ACGAACAGAT TTACCGCCAG CTGAACACCC TGAAGCAGCA GGTAAACAGC CTGGACAAGG ATTTTGATTT TAAGTCTGAG GGGGCAGCGG TCACGGCTGA GCCTGTAATG ACCGCCCCGG TTAAAGAAAC ACCTGTGCGT GAACAAAGTG ACTTTATGGC TAAGGCAGTG GACACCTCGG ATATTCTGGA ATCGGATACC CGGGAATTGA TTGTACGTGA CAAGGAAATA GAGCTGGAGA TACTGCCGCC GGTAGATGCG GTGAAAATAA CTAAAATAAT GGACCAGCTG GAAAACGCCA GTGAGGTTGA GGTGGTAGAG CTGATACCCC GCCCCAATCA CCCGGTGATT ATAGTATATG AAAATAAGCC CAACAGCCTG CTGGATGTAC TTAGGAAACT GAGCATGGTA GGCAAGGTAA ATGAAATTCC GGCCAGCCCC AACGGGAGCG GGATTGTACG GCGTAAGTAC GAAATATCTC TGGCGGCCAA CGCCGTTAAG TAA
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Protein sequence | MAGNNPNIFT INDHEFNITQ KGLDPEQVKV FIEKLLEENS RYTAELARMK EQAEHLDSLK KLADATVMEA DKLAARLKEE AVAKAKAESD SLIAKAEEKA RKVYEQIYRQ LNTLKQQVNS LDKDFDFKSE GAAVTAEPVM TAPVKETPVR EQSDFMAKAV DTSDILESDT RELIVRDKEI ELEILPPVDA VKITKIMDQL ENASEVEVVE LIPRPNHPVI IVYENKPNSL LDVLRKLSMV GKVNEIPASP NGSGIVRRKY EISLAANAVK
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