Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0985 |
Symbol | nusA |
ID | 3229751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 903504 |
End bp | 904979 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637120549 |
Product | transcription elongation factor NusA |
Protein accession | YP_181708 |
Protein GI | 57234284 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00150789 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCG ACTTTTTGCT CGCTATCACC CAGCTCTCGG CAGAAAAGAA TCTGCCAAAG GAAGTAGTAC TTGCTACCGT TGAGTCGGCT TTGGTATCGG CTTATCGTAA AGAGAGCTTT GCTCCAAACC AGAATATCGC GGTGAAGATA GACCAGCTGA CTGGCAAGGT AAAGGTCATG GCCGAAAAGC TGGTAGTTGA AAAAGTGACT GACAGCCGCC AGGAAATGCG TTTGCTTGAG GCCAAACGGC TGAAAGCTGA TGCCAAGATA GGCGACCTTA TGATGGTTGA AGATACTCCG GCTGATGCCG GGCGTATTGC TGCCCAAACT GCCAAGCAGG TTATCCTGCA GCGTCTGCAT GAAGCGGAAA ATACGGCTAT TTTTGACGAA TATGCCTCCA AGGCGGGTGA CACCCTGGTA GGCGTGGTTC AGCGTATAGA GCCCAAGCAG ATTACTGTTG ATATAGGCCG GGTGGAAGCC ATAATGCCCG CCAGCGAACA GGCATACGGT GAAAGGTATC GGGCCGGGCA GCGTATAAAG GTGTATGTAG TGGATGTGGC TAAAACAGCC AAAGGCCCGG CTGTTATTGT TTCGCGTTCT CACCCCGGTT TGGTACGGCG TCTGTTTGAA ATGGAAGTGC CGGAGGTTTT TAACCAGCTG GTAGAGATAA AGGCGGTTGC CCGTGAAGCC GGTTCACGCT CTAAAGTAGC GGTAGGCGCT TTACAGCCGG GGATTGACCC GGTGGGTTGC TGTGTGGGTT TGCGGGGTAT CCGCATTCAG AATATTGTCA GTGAGCTGAA CGGCGAAAAG ATAGATGTGG TGGCCTGGGA TAGTGAAATA GCTAATTTTA TTGCCAATTC ACTTAGCCCG GCTCAGGTTA CAAAAGTTAT TCTGAACGAA GCTGAAAAAT CTGCTATTGT GGTCATACCT GACCGCCAGC TGAGTTTGGG TATTGGTAAA GAAGGACAGA ATGTGCGTCT GGCGGTTAAG CTGACCGGCT GGCGGATTGA TATTAAGAGT GCCTCTGATG AAGAGGTGGA ACGGGCGGAA GAAACTGCCC GCAAGCAGGG GGAAACTGAA AAGCCTGCCA TAACCGAAAA GGTTATTGAA AAACAGCCTG CCGCTGCACC TGCTGCCAAG GCCGAAGCAG AACCTATTGA GCCGGTCATG CCTGAGGCTA TAATAGCCGA ACCGGCGGTG AAGGAAACAC CTGCCAAGAC TGAAGCCGTG CCTGAAGAAC AGGGTGTGGT GGTACCCCTT AATGTGCTGG ATAAAGTGGC TGAGGGTGAT ACAGTCAAAC TGCGTTTTGC AGAAGATTTG CTGCCCCGGC GTGAAATAGT CATAGATGAT AAAAACAAGG GTAAAAACAA GAAAAAGACC GTCAAAGGCA AAGATACCGC TGAAGATGGT ATCAAGCTGA AGGGCAAAAA ACGGCGGAAT GTAACGGATT ATGAATCAGA GGAAATCGAC TTCTAA
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Protein sequence | MKSDFLLAIT QLSAEKNLPK EVVLATVESA LVSAYRKESF APNQNIAVKI DQLTGKVKVM AEKLVVEKVT DSRQEMRLLE AKRLKADAKI GDLMMVEDTP ADAGRIAAQT AKQVILQRLH EAENTAIFDE YASKAGDTLV GVVQRIEPKQ ITVDIGRVEA IMPASEQAYG ERYRAGQRIK VYVVDVAKTA KGPAVIVSRS HPGLVRRLFE MEVPEVFNQL VEIKAVAREA GSRSKVAVGA LQPGIDPVGC CVGLRGIRIQ NIVSELNGEK IDVVAWDSEI ANFIANSLSP AQVTKVILNE AEKSAIVVIP DRQLSLGIGK EGQNVRLAVK LTGWRIDIKS ASDEEVERAE ETARKQGETE KPAITEKVIE KQPAAAPAAK AEAEPIEPVM PEAIIAEPAV KETPAKTEAV PEEQGVVVPL NVLDKVAEGD TVKLRFAEDL LPRREIVIDD KNKGKNKKKT VKGKDTAEDG IKLKGKKRRN VTDYESEEID F
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