Gene DET0985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0985 
SymbolnusA 
ID3229751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp903504 
End bp904979 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content50% 
IMG OID637120549 
Producttranscription elongation factor NusA 
Protein accessionYP_181708 
Protein GI57234284 
COG category[K] Transcription 
COG ID[COG0195] Transcription elongation factor 
TIGRFAM ID[TIGR01953] transcription termination factor NusA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00150789 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCG ACTTTTTGCT CGCTATCACC CAGCTCTCGG CAGAAAAGAA TCTGCCAAAG 
GAAGTAGTAC TTGCTACCGT TGAGTCGGCT TTGGTATCGG CTTATCGTAA AGAGAGCTTT
GCTCCAAACC AGAATATCGC GGTGAAGATA GACCAGCTGA CTGGCAAGGT AAAGGTCATG
GCCGAAAAGC TGGTAGTTGA AAAAGTGACT GACAGCCGCC AGGAAATGCG TTTGCTTGAG
GCCAAACGGC TGAAAGCTGA TGCCAAGATA GGCGACCTTA TGATGGTTGA AGATACTCCG
GCTGATGCCG GGCGTATTGC TGCCCAAACT GCCAAGCAGG TTATCCTGCA GCGTCTGCAT
GAAGCGGAAA ATACGGCTAT TTTTGACGAA TATGCCTCCA AGGCGGGTGA CACCCTGGTA
GGCGTGGTTC AGCGTATAGA GCCCAAGCAG ATTACTGTTG ATATAGGCCG GGTGGAAGCC
ATAATGCCCG CCAGCGAACA GGCATACGGT GAAAGGTATC GGGCCGGGCA GCGTATAAAG
GTGTATGTAG TGGATGTGGC TAAAACAGCC AAAGGCCCGG CTGTTATTGT TTCGCGTTCT
CACCCCGGTT TGGTACGGCG TCTGTTTGAA ATGGAAGTGC CGGAGGTTTT TAACCAGCTG
GTAGAGATAA AGGCGGTTGC CCGTGAAGCC GGTTCACGCT CTAAAGTAGC GGTAGGCGCT
TTACAGCCGG GGATTGACCC GGTGGGTTGC TGTGTGGGTT TGCGGGGTAT CCGCATTCAG
AATATTGTCA GTGAGCTGAA CGGCGAAAAG ATAGATGTGG TGGCCTGGGA TAGTGAAATA
GCTAATTTTA TTGCCAATTC ACTTAGCCCG GCTCAGGTTA CAAAAGTTAT TCTGAACGAA
GCTGAAAAAT CTGCTATTGT GGTCATACCT GACCGCCAGC TGAGTTTGGG TATTGGTAAA
GAAGGACAGA ATGTGCGTCT GGCGGTTAAG CTGACCGGCT GGCGGATTGA TATTAAGAGT
GCCTCTGATG AAGAGGTGGA ACGGGCGGAA GAAACTGCCC GCAAGCAGGG GGAAACTGAA
AAGCCTGCCA TAACCGAAAA GGTTATTGAA AAACAGCCTG CCGCTGCACC TGCTGCCAAG
GCCGAAGCAG AACCTATTGA GCCGGTCATG CCTGAGGCTA TAATAGCCGA ACCGGCGGTG
AAGGAAACAC CTGCCAAGAC TGAAGCCGTG CCTGAAGAAC AGGGTGTGGT GGTACCCCTT
AATGTGCTGG ATAAAGTGGC TGAGGGTGAT ACAGTCAAAC TGCGTTTTGC AGAAGATTTG
CTGCCCCGGC GTGAAATAGT CATAGATGAT AAAAACAAGG GTAAAAACAA GAAAAAGACC
GTCAAAGGCA AAGATACCGC TGAAGATGGT ATCAAGCTGA AGGGCAAAAA ACGGCGGAAT
GTAACGGATT ATGAATCAGA GGAAATCGAC TTCTAA
 
Protein sequence
MKSDFLLAIT QLSAEKNLPK EVVLATVESA LVSAYRKESF APNQNIAVKI DQLTGKVKVM 
AEKLVVEKVT DSRQEMRLLE AKRLKADAKI GDLMMVEDTP ADAGRIAAQT AKQVILQRLH
EAENTAIFDE YASKAGDTLV GVVQRIEPKQ ITVDIGRVEA IMPASEQAYG ERYRAGQRIK
VYVVDVAKTA KGPAVIVSRS HPGLVRRLFE MEVPEVFNQL VEIKAVAREA GSRSKVAVGA
LQPGIDPVGC CVGLRGIRIQ NIVSELNGEK IDVVAWDSEI ANFIANSLSP AQVTKVILNE
AEKSAIVVIP DRQLSLGIGK EGQNVRLAVK LTGWRIDIKS ASDEEVERAE ETARKQGETE
KPAITEKVIE KQPAAAPAAK AEAEPIEPVM PEAIIAEPAV KETPAKTEAV PEEQGVVVPL
NVLDKVAEGD TVKLRFAEDL LPRREIVIDD KNKGKNKKKT VKGKDTAEDG IKLKGKKRRN
VTDYESEEID F