| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0985 |
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| Symbol | nusA |
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| ID | 3229751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 903504 |
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| End bp | 904979 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637120549 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_181708 |
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| Protein GI | 57234284 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00150789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGCG ACTTTTTGCT CGCTATCACC CAGCTCTCGG CAGAAAAGAA TCTGCCAAAG
GAAGTAGTAC TTGCTACCGT TGAGTCGGCT TTGGTATCGG CTTATCGTAA AGAGAGCTTT
GCTCCAAACC AGAATATCGC GGTGAAGATA GACCAGCTGA CTGGCAAGGT AAAGGTCATG
GCCGAAAAGC TGGTAGTTGA AAAAGTGACT GACAGCCGCC AGGAAATGCG TTTGCTTGAG
GCCAAACGGC TGAAAGCTGA TGCCAAGATA GGCGACCTTA TGATGGTTGA AGATACTCCG
GCTGATGCCG GGCGTATTGC TGCCCAAACT GCCAAGCAGG TTATCCTGCA GCGTCTGCAT
GAAGCGGAAA ATACGGCTAT TTTTGACGAA TATGCCTCCA AGGCGGGTGA CACCCTGGTA
GGCGTGGTTC AGCGTATAGA GCCCAAGCAG ATTACTGTTG ATATAGGCCG GGTGGAAGCC
ATAATGCCCG CCAGCGAACA GGCATACGGT GAAAGGTATC GGGCCGGGCA GCGTATAAAG
GTGTATGTAG TGGATGTGGC TAAAACAGCC AAAGGCCCGG CTGTTATTGT TTCGCGTTCT
CACCCCGGTT TGGTACGGCG TCTGTTTGAA ATGGAAGTGC CGGAGGTTTT TAACCAGCTG
GTAGAGATAA AGGCGGTTGC CCGTGAAGCC GGTTCACGCT CTAAAGTAGC GGTAGGCGCT
TTACAGCCGG GGATTGACCC GGTGGGTTGC TGTGTGGGTT TGCGGGGTAT CCGCATTCAG
AATATTGTCA GTGAGCTGAA CGGCGAAAAG ATAGATGTGG TGGCCTGGGA TAGTGAAATA
GCTAATTTTA TTGCCAATTC ACTTAGCCCG GCTCAGGTTA CAAAAGTTAT TCTGAACGAA
GCTGAAAAAT CTGCTATTGT GGTCATACCT GACCGCCAGC TGAGTTTGGG TATTGGTAAA
GAAGGACAGA ATGTGCGTCT GGCGGTTAAG CTGACCGGCT GGCGGATTGA TATTAAGAGT
GCCTCTGATG AAGAGGTGGA ACGGGCGGAA GAAACTGCCC GCAAGCAGGG GGAAACTGAA
AAGCCTGCCA TAACCGAAAA GGTTATTGAA AAACAGCCTG CCGCTGCACC TGCTGCCAAG
GCCGAAGCAG AACCTATTGA GCCGGTCATG CCTGAGGCTA TAATAGCCGA ACCGGCGGTG
AAGGAAACAC CTGCCAAGAC TGAAGCCGTG CCTGAAGAAC AGGGTGTGGT GGTACCCCTT
AATGTGCTGG ATAAAGTGGC TGAGGGTGAT ACAGTCAAAC TGCGTTTTGC AGAAGATTTG
CTGCCCCGGC GTGAAATAGT CATAGATGAT AAAAACAAGG GTAAAAACAA GAAAAAGACC
GTCAAAGGCA AAGATACCGC TGAAGATGGT ATCAAGCTGA AGGGCAAAAA ACGGCGGAAT
GTAACGGATT ATGAATCAGA GGAAATCGAC TTCTAA
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| Protein sequence | MKSDFLLAIT QLSAEKNLPK EVVLATVESA LVSAYRKESF APNQNIAVKI DQLTGKVKVM
AEKLVVEKVT DSRQEMRLLE AKRLKADAKI GDLMMVEDTP ADAGRIAAQT AKQVILQRLH
EAENTAIFDE YASKAGDTLV GVVQRIEPKQ ITVDIGRVEA IMPASEQAYG ERYRAGQRIK
VYVVDVAKTA KGPAVIVSRS HPGLVRRLFE MEVPEVFNQL VEIKAVAREA GSRSKVAVGA
LQPGIDPVGC CVGLRGIRIQ NIVSELNGEK IDVVAWDSEI ANFIANSLSP AQVTKVILNE
AEKSAIVVIP DRQLSLGIGK EGQNVRLAVK LTGWRIDIKS ASDEEVERAE ETARKQGETE
KPAITEKVIE KQPAAAPAAK AEAEPIEPVM PEAIIAEPAV KETPAKTEAV PEEQGVVVPL
NVLDKVAEGD TVKLRFAEDL LPRREIVIDD KNKGKNKKKT VKGKDTAEDG IKLKGKKRRN
VTDYESEEID F
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