| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0981 |
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| Symbol | truB |
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| ID | 3229762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 900192 |
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| End bp | 901094 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637120545 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_181704 |
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| Protein GI | 57234295 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.256266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGGCA TCTTGAATAT CAACAAACCT CCAGGTTTGA CCTCTTTCGG GGTGGTCTCA
AAAGTAAGGC ATATTTACTC CCAGAAAAAG GTAGGGCATG GCGGTATGCT TGACCCGAGT
GCCACCGGGG TTATACCTGT TTTTCTGGGA AGCGCAACCC GCCTGATAGA GTACCTTTCT
TCAGTCCGCA AAACCTATCT GGCTGAAATA GAGCTGGGTA CGGAGACAGA TAGCTACGAT
AGCGAAGGGG AGATTACTTC CCGAAAGAGC TGTGAACATA TTACTGCTGA TATGGTGCGT
AATGCTTTGC CGGATTTTCT GGGTGAGATA ACCCAGATTC CCCCCATGTA CAGTGCGGTA
AAACACCGCG GGGTTCGCCT GTATAACCTG GCCAGGCAGG GGATAGAGGT TGAAAGAAAC
CCGCGTAAAG CTGCGATTTA CGGCATTGAA TTCCTCGGTT TTGCTTCACC TGTGCTGCGT
TTGCGGATAG AGTGCGGACA CGGTACGTAT ATACGTTCTA TAGCCTTTGA TTTAGGCAGG
AAACTGGGCT GCGGGGCATA TTTGAAAACC CTGGTCAGGG AATCTTACGG CCCATTCCAC
CTTACAACTT CACTTGATTT GGCTGACCTT GAAGCGGCTG AAAATAAAGG AAGGCTGGCA
GATATTCTGC TGCCGCCGGA AGCCGCCGTA GGGCATTTGC CGCGTATAAC CCTTGATGAT
GAAAGTATAA CCCGGCTGGT AAACGGGTTG GAAATAAGGC TGGAAATGAC CGGGCAGCCG
GAAGCTATGG CGGTGTATAG CGCTGAAAAC CGCTTTGCGG CTGTAATCCG CCCTGAAACT
GACGGCAGCT GGCACCCTGC CAAAGTCTTC CTGAGCCCAT GCCCTAAAAA GAATGCGGAT
TAG
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| Protein sequence | MNGILNINKP PGLTSFGVVS KVRHIYSQKK VGHGGMLDPS ATGVIPVFLG SATRLIEYLS
SVRKTYLAEI ELGTETDSYD SEGEITSRKS CEHITADMVR NALPDFLGEI TQIPPMYSAV
KHRGVRLYNL ARQGIEVERN PRKAAIYGIE FLGFASPVLR LRIECGHGTY IRSIAFDLGR
KLGCGAYLKT LVRESYGPFH LTTSLDLADL EAAENKGRLA DILLPPEAAV GHLPRITLDD
ESITRLVNGL EIRLEMTGQP EAMAVYSAEN RFAAVIRPET DGSWHPAKVF LSPCPKKNAD
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