Gene DET0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0978 
Symbol 
ID3229765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp897521 
End bp898669 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content48% 
IMG OID637120542 
Productglycosyl transferase, group 1 family protein 
Protein accessionYP_181701 
Protein GI57234298 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000355781 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGATAG TTTTAGTCTG TCCTTATGAT TTTGCCTATC CGGGTGGCGT AGTTAACCAC 
GTTAGCTCGC TTTATAAAGA ACTTAAGATG CTGGGGCATG ATGTTCGCAT TATTGCTCCA 
GCATCAAAGT CTCCGGCAGA ATACGGTACT GATTTTATCA GGATGGGCAA GCCCCGCCCT 
CTGGCTATCT CCGGCACAGT GGTTCGCATC AGCCTTTCGG TCAATCTTAA AAACCGTATT 
AAACAGGTTT TGGAAACCGA AAAGTTTGAC GTTATCCACC TGCATGAGCC TTTTATGATA 
ATGCTGTGCA GTGCCATGCT CCGGTTTTCC AAAACCTGCA ATGTAGCTAC TTTCCACGCC 
AGTCAGGGCA AGCCCGGTTA TAATTTGGGC TGGCCTTTTA CCCGCATATT CCTGAGAAGG 
CGCAGGCGTA ATCTTCACGG GCATATGGCG GTTTCCAAAG CGGCTCTGCG TTTTGCCTCC 
AAATATATCC CCGGTGACTA TACTATTGTG CCCAACGGTA TAGACCTGGA TTTATTTAAT 
ACCGAAGTTC AGCCTGTGCC GGAGTATCTG GATGACAAGC TGAATATCCT TTTTGTGGGG 
CGTATGGAGA GCCGAAAGGG TTTGGACTAT CTGATTGATG CATACGCCCA GATTAAGCCC 
CTGTGCCCCC AGACCAGGCT TCTGGTAGTG GGGCCGGGTA CTCCCAGGCA AATGAGCCAT 
TATCGCAGCA AGGTAAAACG GCATGGGCTT TCAGATGTGG TTTTTACCGG CGGGGTTGCC 
TGTAATGAGC TGCCGCGGTA TTACAAGACA GCCCATATTT ACTGCTCCCC GGCTACCGGT 
CAGGAAAGTT TCGGCATTGT ACTTCTGGAA GCTATGGCTT TGGGTGTGCC GATTGTGGCT 
TCACAAATAG AGGGATACCA GTGTGTACTG ACGGATAATA AAGAAGGTCT GTTAGTACCG 
CCCAAAAACT CTGATAAACT GGCAGAAGCT CTTTTGAAAC TGATTGCCCA GCCTGATTTG 
CGTTCTGAAC TCAGCGCCGG TGGACTAAAA ACGGTTCAGC AGTACAGTTG GAAAAGAGTT 
GCTAAAAAAG TTGAAGAGTA CTACCATTTG GTGTTAAGCA AAAATCACCA TGGTCCCGAA 
GGTAAATAG
 
Protein sequence
MKIVLVCPYD FAYPGGVVNH VSSLYKELKM LGHDVRIIAP ASKSPAEYGT DFIRMGKPRP 
LAISGTVVRI SLSVNLKNRI KQVLETEKFD VIHLHEPFMI MLCSAMLRFS KTCNVATFHA 
SQGKPGYNLG WPFTRIFLRR RRRNLHGHMA VSKAALRFAS KYIPGDYTIV PNGIDLDLFN 
TEVQPVPEYL DDKLNILFVG RMESRKGLDY LIDAYAQIKP LCPQTRLLVV GPGTPRQMSH 
YRSKVKRHGL SDVVFTGGVA CNELPRYYKT AHIYCSPATG QESFGIVLLE AMALGVPIVA 
SQIEGYQCVL TDNKEGLLVP PKNSDKLAEA LLKLIAQPDL RSELSAGGLK TVQQYSWKRV 
AKKVEEYYHL VLSKNHHGPE GK