| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0970 |
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| Symbol | pnp |
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| ID | 3229678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 889292 |
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| End bp | 891454 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637120534 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_181693 |
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| Protein GI | 57234211 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATAACTG CCAACTCATT TGAACGAACT ATTGGCGGCA GAAAACTTAC TATAGAGAGC
GGGAAAATGG CCCGCCTTGC AGATGCCGCA GTAACTATCC GCTATGCGGA TACCGAATTA
CTGGTAACAC TTTGTGCTGC CAAAAAACCG CGCGAAGGGG TGGATTTCCT CCCCCTGACT
ATAGACTACG AAGAGCGGAT GTATGCCGCA GGCAAAATCC CCGGCGGGTT TATCCGCCGC
GAAGGACGCC CCAGTGAACA GGCTATTTTG GCCGGACGTC TGACAGACAG ACCTCTCCGC
CCCCTTCTCC CCAAGGAGTG GCGGAATGAA CTTCAGATTA TTATCACCGT AATTGCCTCA
GACAAGGAAA ATGACGCTGA TATCTGGGGT GTGGTAGGTG CTTCAACCGT TCTTACCATG
TCACAAATAC CCTACGAAGG CCCGGTGGGA GCCAGCCGCG TAGGTTATAC AAACGGCGAA
TTCGTGCTTA ACCCCACCTT TGCCCAGCTG GAACAAAGCC AGATGGATTT GGTGGTAGTC
AGCACCCGTA AAGCCGTAGT TATGATTGAA GCCGGGTCTA AGGAAATTCC CGAAGACCTT
ATGATTAAAG CGATTGAGTT TGCCCATCAG GCAAATCAGG AGCTTATTGA CCTGCAGGAT
GAAATCCGCG CCAAGCTGGG CAAGGAAAAA CTGCCGGTGC CGGTGCTGGA AATACCCGAA
GAAGTCAAAG CAGCGGTAGC CGCCTTTGTA AAAGGGCGAG TAAACGAAGC CCTGAGCCAT
CAGGATAAAA CCCTCCGTGA AAATGCGGTT GAAGCCCTTC AGAGCGAACT GGTTGAAGCT
TTGGCAGAGA CATATGCCGA AGGCGATATT CTGGCCGCTT ATGATAAAGA AATCAAAAAG
GCTATCCGCT CAACTATACT TGAAAAAGAT ATCAGGGTAA ACGGACGGGG TATTAAGCAG
CTCCGCCAGC TGGACGCTGA AACAGGTATT CTGCCCCGCG TTCACGGTTC AGCTTTGTTC
ACCCGGGGTG ATACCCAGGT TATGGCCATT ACCACACTGG GTTCTTTGCA GGAAGCCCAG
CAGCTGGACG GCTTGAGTGC CGAAGATACC AAGCGTTTTA TGCTTCACTA TAATTTTGCC
CCCTTCTCTA CCGGTGAAGT TAAGCGTTCC GGCTCCCCCG GACGGCGTGA AATCGGTCAT
GGTGCTTTAG CTGAAAGGGC TTTGGTGCCT GTCCTGCCCA CTCCCGAAGA ATTTCCCTAT
ACCATTCGTA TGGTAGCTGA CGTAGTCGGT TCATCAGGCT CTACTTCTAT GGGCAGTGTC
TGTTCGTCCA GTTTGTCACT TATGGATGCA GGTGTACCAG TTAAAAAAGC TGTTGCCGGT
ATTTCCATCG GCCTTATTAC CGGTGAAAAT GATACCTACT GCACCATTAC TGATATTGAA
GGTATTGAAG ATAACTACGG CGATATGGAT TTCAAAGTTG CCGGTACCCG TGACGGCATA
ACCGCCATAC AGGTGGATAT GAAAGTCAAG GGTATCAGCT TTGACGTTAT CCGTGACGCT
ATCTACCAGG CCAAAGAAGC CCGCTATACC ATACTGGAAG TAATGGACAA GGCTCTTGCC
CAGCCCAAGA CCGAGCTTAG CCCTTACGCC CCCAGAATGT ACAAGATAAG CATTGACCCC
TCCAAGATTG GCAGTGTTAT CGGCAGCGGC GGCAAGACCA TCCGCTCTAT TATTGAGCAG
ACCAATACCA CCGTTGATAT TGAAAATGAC GGCACAGTGG TCATCGGTGC TACTGACGAA
GCTTCGGCCC AAAAAGCTAT AAAGATAATT GAAGACCTGA CCAAAGATGT AGAAGCCGGC
AGTGTTTATA CCGGTAAAGT TACCCGGATA ATGACCTTTG GTGCTTTTGT TGAAATCCTG
CCCGGCAAAG AGGGCATGGT ACACATAAGC GAACTGGCCG ACCACAGAGT GGAAAAAGTG
GAAGACGTAG TTAAAGTGGG TGACGAAATA ACAGTAAAGG TAACTGAGAT TGATTCACAG
GGCAGAATAA ACCTGTCACG CCGGGTCATT CTCAATCCCA ATGCTGTTCC CATCTCCCGC
AACCGTGATT CCCAGCCGCG CCGTTCCGGG CCTTTCCGCC CTCAAGACCG GTCTAACTCA
TAA
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| Protein sequence | MITANSFERT IGGRKLTIES GKMARLADAA VTIRYADTEL LVTLCAAKKP REGVDFLPLT
IDYEERMYAA GKIPGGFIRR EGRPSEQAIL AGRLTDRPLR PLLPKEWRNE LQIIITVIAS
DKENDADIWG VVGASTVLTM SQIPYEGPVG ASRVGYTNGE FVLNPTFAQL EQSQMDLVVV
STRKAVVMIE AGSKEIPEDL MIKAIEFAHQ ANQELIDLQD EIRAKLGKEK LPVPVLEIPE
EVKAAVAAFV KGRVNEALSH QDKTLRENAV EALQSELVEA LAETYAEGDI LAAYDKEIKK
AIRSTILEKD IRVNGRGIKQ LRQLDAETGI LPRVHGSALF TRGDTQVMAI TTLGSLQEAQ
QLDGLSAEDT KRFMLHYNFA PFSTGEVKRS GSPGRREIGH GALAERALVP VLPTPEEFPY
TIRMVADVVG SSGSTSMGSV CSSSLSLMDA GVPVKKAVAG ISIGLITGEN DTYCTITDIE
GIEDNYGDMD FKVAGTRDGI TAIQVDMKVK GISFDVIRDA IYQAKEARYT ILEVMDKALA
QPKTELSPYA PRMYKISIDP SKIGSVIGSG GKTIRSIIEQ TNTTVDIEND GTVVIGATDE
ASAQKAIKII EDLTKDVEAG SVYTGKVTRI MTFGAFVEIL PGKEGMVHIS ELADHRVEKV
EDVVKVGDEI TVKVTEIDSQ GRINLSRRVI LNPNAVPISR NRDSQPRRSG PFRPQDRSNS
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