| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0953 |
|---|
| Symbol | |
|---|
| ID | 3229710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 872945 |
|---|
| End bp | 875431 |
|---|
| Gene Length | 2487 bp |
|---|
| Protein Length | 828 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637120517 |
|---|
| Product | copper-translocating P-type ATPase |
|---|
| Protein accession | YP_181678 |
|---|
| Protein GI | 57234243 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAA AGAACCTGCC GGATACTTTG CCAAAGATAA TCATGGGTAT AAGCGGTATG
TCATGTACCA GATGCGCCGC CAGTATAGAA GCGCGTTTGT CAAAAACAGA CGGGATAACA
GACCCCAAAC TGAATTTTGC CTCCGCCAAA CTTATATTCA GCTATGACCC GGCCGTTATC
AGCCTGGCAG ATATTAAATC TATTATTTCG GGCTTGGGTT ACGGCGTTAT CAGCCGCAAA
TCCATTTTCC CCATAAAGGG CCTCCACTGT GCTTCCTGCG TAGCCAGAGC CGAAAAAGCC
CTGAAGAACA CAAACGGGGT TCTCAGTGCC AGTGTAAACC TGGCTAATCA GACTGCCAAT
GTGGAGTATC TGGATTTTAT TTCCTACCGT GAACTCAGCC AAGCCATAAA AAACACCGGC
TACGAACTGC TGTCGGAAGA AACACCCCAA AACGAGCTTA ACAGCTCGGA AAATGCCGAA
ACCCGCAAAC TGCAACAGGA ACTTACAGTT GCTCTGGTGC TGGGAATAAG CCTTATGATT
ATAGGATTCC TGCCAGCCTT TGGCGGCAAG GAATTTATTA TGTTCTTGCT GGCTACGCCC
GTGCAGTTCT GGGCTGGGCT GCGTTTTTAC CGCGGGGCAT TTGCCGCCCT GAAAAACCGC
ACCTCGGACA TGAATACTCT TATCGCCCTG GGTACTTCTG CAGCTTACCT GTACAGCCTG
ACTGCTTTGG TATTCCCCTC AATATTTGAT TCACCGCTGC TGGAAAAGCA CCTTTACTTT
GATACCTCCG CCATGATTAT CGCCCTTATC CTGACCGGGC GTTTTCTGGA AGCCCGTGCC
AAAGGGCGCA CCTCTGATGC CATCCGCCGT CTGGTCGGCC TTCAGCCAAG TACCGCTTCA
ATTATCCGGG ACGGCAAGGA AATACTGGTG GGCATCAGCG AAGTGGTGGC TGGAGATAAA
ATTGTTATCC GTCCGGGGGA ACGGCTGCCG GTTGACGGGC TGATATTGGA AGGCTATTCC
AGCCTGGACG AATCTATGGT AACCGGAGAG AGTATACCGG CTGAAAAAAA AGCCGGGGAT
TATGTTATCG GCGGTACGTT TAATCAAACC GGCGCATTTA CTTACGAAGC TCAAAAAGTA
GGGGCGGATA CCGCCCTGGC CAGGATAATC CGGCTGGTTG AGGAAGCTCA GGGAAGCAAA
GCCCCTATCC AGCGTCTGGC GGACAAAATA GCCTCGGTAT TTGTACCGGC GGTTATCAGT
ATAGCCATAC TGACCTTTGT GTTCTGGCTG GTATTCGGGC CAGAGCCATC TTTTACCTAT
GCCGCTTTAA ATATGATAGC CGTACTTGTT ATTGCCTGCC CGTGTGCTTT GGGGCTGGCC
ACACCCACCG CTTTAATTGT GGGTATGGGC AAAGGGGCTG AAAACGGAAT ACTTATCCGC
AGTGCGGTGG CACTGGAGAA AATGCATAAA CTGGATACAA TTGTACTGGA TAAAACGGGT
ACTCTTACCC GCGGCAAACC GGTGCTAAGC AATCTGGTAA GCCATACCAT GGATAAAGAT
TCCTTCTTAA CCCTGGTAGC CTCTGCCGAA CAGTTTTCCG AACACCCTCT GGCCAAAGCA
GTGGTAAAAG AGGCTGCGCG CAAAAAACTA AAGATTACCT CCTCGTCAGA GTTTTCCGCC
CTGCCCGGTG CGGGGTTAAA AGCCACTGTT AGCGGCAAAC AAATACTCAT CGGCAACGCA
AACCTGATGC AGTCAAACCG GATATCCCTT GCTGAATACC AATCTGAGGC TGACAAGCTC
TGGGAAGCCG GGGAAAACCT TATTTTCGTG GCAGCGGACG GCAAACTTGA GGGTATGGTG
GCGGTACGGG ATATATTAAA ACGCGAATCC CAGGCGGTGG TAGCCGAACT CAAGGCAAAT
AAACTCCGCA CTATTATGCT CACCGGTGAC AACCAGAGGG CAGCCAAACG CATTGCAGAC
GAACTTGGCT TGGACCAGTA TATATCTGAG GTAAAGCCTG AAGACAAATC AAGGCTGGTA
CAGGAACTGC AAGACCAAGG TCACTTTGTA GCTATGGTGG GAGACGGTAT AAATGATGCC
CCGGCACTGG CAAAGGCAGA CGTAGGCATA GCCATAGGCA CCGGCACTGA TATAGCTATG
GAAACCGGTG ATATCACCCT TATCTCAGGT GATTTATTCG GTCTTACCAA AGCTATCGTC
CTTAGCAAGG CAACTTTTAA TACTATCCGC CAAAATCTTT TCTGGGCTTT TTTCTACAAT
ATTATCCTGA TACCCGTGGC AGCCGGGGTA CTCTACCTGT TTTTAAGCCA CAGCGGTGTC
CCCCAATCCC TTCATTTCTT CCTGGGAGAA TACGGATTTT TAAACCCCAT ACTGGCAGCT
CTGGCCATGG CCGTCAGCTC TCTGACTGTA GTCAGCAATT CCCTCCGCCT GCGCAGGGTA
AAACTAAATA CTTATCTAAA GCAATAA
|
|---|
| Protein sequence | MPEKNLPDTL PKIIMGISGM SCTRCAASIE ARLSKTDGIT DPKLNFASAK LIFSYDPAVI
SLADIKSIIS GLGYGVISRK SIFPIKGLHC ASCVARAEKA LKNTNGVLSA SVNLANQTAN
VEYLDFISYR ELSQAIKNTG YELLSEETPQ NELNSSENAE TRKLQQELTV ALVLGISLMI
IGFLPAFGGK EFIMFLLATP VQFWAGLRFY RGAFAALKNR TSDMNTLIAL GTSAAYLYSL
TALVFPSIFD SPLLEKHLYF DTSAMIIALI LTGRFLEARA KGRTSDAIRR LVGLQPSTAS
IIRDGKEILV GISEVVAGDK IVIRPGERLP VDGLILEGYS SLDESMVTGE SIPAEKKAGD
YVIGGTFNQT GAFTYEAQKV GADTALARII RLVEEAQGSK APIQRLADKI ASVFVPAVIS
IAILTFVFWL VFGPEPSFTY AALNMIAVLV IACPCALGLA TPTALIVGMG KGAENGILIR
SAVALEKMHK LDTIVLDKTG TLTRGKPVLS NLVSHTMDKD SFLTLVASAE QFSEHPLAKA
VVKEAARKKL KITSSSEFSA LPGAGLKATV SGKQILIGNA NLMQSNRISL AEYQSEADKL
WEAGENLIFV AADGKLEGMV AVRDILKRES QAVVAELKAN KLRTIMLTGD NQRAAKRIAD
ELGLDQYISE VKPEDKSRLV QELQDQGHFV AMVGDGINDA PALAKADVGI AIGTGTDIAM
ETGDITLISG DLFGLTKAIV LSKATFNTIR QNLFWAFFYN IILIPVAAGV LYLFLSHSGV
PQSLHFFLGE YGFLNPILAA LAMAVSSLTV VSNSLRLRRV KLNTYLKQ
|
|---|
| |