Gene DET0948 details

Gene Information

• Locus tag: DET0948
• Symbol: iorB
• ID: 3229724
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 870832
• End bp: 871416
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637120512
• Product: indolepyruvate oxidoreductase subunit beta
• Protein accession: YP_181673
• Protein GI: 57234257
• COG category: [C] Energy production and conversion
• COG ID: [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
• TIGRFAM ID: [TIGR03334] indolepyruvate ferredoxin oxidoreductase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.15267
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGT TTGGTATATT GATTGTAGGC GTGGGCGGAC AGGGGGTAAT ACTGGCCAGC 
AATATTCTGT GTGATGCGGC CATGGCTGCC GGTTATGATG TCAAAAAGAC AGATACTTTG 
GGCATGGCAC AACGCGGCGG GAGTGTAGTC AGCCACCTGC GTTTTGATAA AGAAGTATCC 
TCCCCCCTTA TCCCGCAGGG ACAGACTGAT TTGATAATTG CCTTTGAAAA ACTGGAGGCC 
GCCCGCTATA TGGAGTATCT GGGCAAACAG ACTAAAGCCG TTATCAATGA TATGGCCATG 
CCCCCGGCCT CAATAAGCCT GGGCATTGCA GAATACCCTT CAGATGCCGA AATACTTGAG 
GGGTATAAAC AAATGGGCAT AAAAGCAGAT TTTATAGCCG CTAACCAGGC AGTCAAAGAG 
CTTGGGAATG CCAAAATGCT GAATATTTAC CTGCTGGGAT ATGCCGCCAG TTATCTGCCC 
TTTGACCACG AGATACTAGC CGGGGCTATA AAAAAGCGTT TGCCCCCAAA GTTACTTGAG 
GGCAATTTGA AAGCATTTGC CGCCGGATAC GCGGCTTCAC GCTAG 

 

Protein sequence

MKKFGILIVG VGGQGVILAS NILCDAAMAA GYDVKKTDTL GMAQRGGSVV SHLRFDKEVS 
SPLIPQGQTD LIIAFEKLEA ARYMEYLGKQ TKAVINDMAM PPASISLGIA EYPSDAEILE 
GYKQMGIKAD FIAANQAVKE LGNAKMLNIY LLGYAASYLP FDHEILAGAI KKRLPPKLLE 
GNLKAFAAGY AASR