| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0946 |
|---|
| Symbol | |
|---|
| ID | 3229726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 866805 |
|---|
| End bp | 868697 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637120510 |
|---|
| Product | AMP-binding protein |
|---|
| Protein accession | YP_181671 |
|---|
| Protein GI | 57234259 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.418296 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAG TAGACACGAT ACCCAAACTG GTAAAGAATA ACGCCGAGCA ATGGGGCAAT
AAGCCCGCCA TGTGTATGAA AAATCTGGGT ATATGGCAGA AATATACCTG GAGTGATTAC
TACGGTACGG TTAAGTATTT CGGTTTGGGG CTGCTCAGTT TGGGGACTAA ACCCGCTGAC
CGGGTGGCTA TTATCGGCGA TAACGAACCC GAATGGTTTT GGGCGGAATT TGCCGCCCAG
GCCATAGGTG CAATCCCCAC CGGTATATAT GTGGACTCTA TCCCTGACGA GGTTAAATAT
ATTGCCCGTC ATGCTGATGT AAAAATAGCA GTAGTAAATG ACCAGGAACA GGCTGACAAA
TTTCTGGAGC TGCTGCCGGA ACTGCCAAAC CTTACCAAGA TTATTTACTG GGACCCCAAA
GGACTTAAAA ATTACGATGA CCCCATGCTG ATAAGCTTTA AAGAAGTGGT GAAGCTGGGG
CAGGAATATG AAAAAGCTCA CCCTGGCTTA TTTGAAGAGC TGCTGGGTGC TACCAAGCCG
GATGATATAG CCTTTATCTA TTACACCTCC GGCACAACCG GCCTTCAGAA AGGGGCTATG
CTCAGCCACC GTTCACTTAT CACTACCGCC AAGGGTTTTA TTGCCCGCTA TCCTCTTGAT
TATAAAGATG ACCTTATTTC AAATTTTCCG GCCTCATGGG TGGGTGACAG CTTTTTCGCT
ACTGTACCCC ATATACTTTC CGGGGCGCGC TTAAACTTTC CCGAAGAGCC GGAAACCGTG
GCTGAAGATA CCCGTGAGAT CGGGCCTGAT TTTGTTATCT ACGGCCCGCG CCAGTGGGAA
AGCCTGGTGA GTGAAATACA GGTAAAAATA ATGGATGCCC ACCCGCTTAA GCGTCTGGCT
TACAGGGCAC TTTCCCCGCT GGGATACAAA ATGGCTGAAA AAATGCTGGC CGGAAGCAAA
CCCGGTCTCC CCTTGAAGAT AGGCCACAAA ATAGCTGACG GGCTGCTGTT TCACCCCTTA
AAAGACAAAC TTGGGGTCAG CAAGGTAAGA TTTGGGGTTA CCGGAAGTTC GGTGCTTTCG
CTGGATACAT TCAAAATGAT ACATTCCATG GGTATTGAGC TAAGGCAGAA TTATGCTTCA
ACCGAAGCCG GGTTTATTTC CTCCCACGGC AAGGGCGATA TCAGCTTTGA AAGCGTGGGG
CGGCCGGCAC TTGGCACGGA AGTGCGCCTG ACAAACGAAG GTGAGCTCCT TATCCGCAGT
GACTGTATGT TCAGCGGTTA TTACAAAGAC CCTGAAAAGA CTGCCCAGAG TTTTAAAAAC
GGCTGGTTTG CCACCGGTGA TGCCGTCAAT ATAAATGAAA AGGGCCACCT AATATTCCTT
GACCGCCTGA AAGATTTGGG CGTGCTGGCA AGCGGGATAA AGTATGCCCC CCAGTATATT
GAAGGGCGCC TCCGTTTCAG CCCTTATATA AAAGATGCCA TGGTGGTTGG CGGTGAAGAC
AAGGAATATG TAACCGCCAT TATAAATATT GATTTTACTA TGGTGAGCAA GTGGGCGCAG
AAAAACCGCT TGAATTTCAC CACCTTTGTA GACCTTTCCC AGAAAAAAGA GGTTGCGGAT
TTGGTTGCCA AAGACCTTAT CCGGGTAAAC AGCTATCTGC CGGAAGGCTC ACGGGTAAAA
AAGTTTGTTT TGCTGCATAA AGAGTTTGAC CCTGACGAAG CTGAACTTAC CCGCACCCGT
AAACTTCGGC GGGGTTTTGT ATCTGAACGG TATAAAGACC TGATAGATGC CATGTACCAT
CTGGATAAAG AAGTAAAGGT GGAAGCGGCG GTAACCTATA GGGACGGGCG CAAGGGCGTG
GTAACTACCA GTATAAAAGT AAGGTCTTTG TAG
|
|---|
| Protein sequence | MAEVDTIPKL VKNNAEQWGN KPAMCMKNLG IWQKYTWSDY YGTVKYFGLG LLSLGTKPAD
RVAIIGDNEP EWFWAEFAAQ AIGAIPTGIY VDSIPDEVKY IARHADVKIA VVNDQEQADK
FLELLPELPN LTKIIYWDPK GLKNYDDPML ISFKEVVKLG QEYEKAHPGL FEELLGATKP
DDIAFIYYTS GTTGLQKGAM LSHRSLITTA KGFIARYPLD YKDDLISNFP ASWVGDSFFA
TVPHILSGAR LNFPEEPETV AEDTREIGPD FVIYGPRQWE SLVSEIQVKI MDAHPLKRLA
YRALSPLGYK MAEKMLAGSK PGLPLKIGHK IADGLLFHPL KDKLGVSKVR FGVTGSSVLS
LDTFKMIHSM GIELRQNYAS TEAGFISSHG KGDISFESVG RPALGTEVRL TNEGELLIRS
DCMFSGYYKD PEKTAQSFKN GWFATGDAVN INEKGHLIFL DRLKDLGVLA SGIKYAPQYI
EGRLRFSPYI KDAMVVGGED KEYVTAIINI DFTMVSKWAQ KNRLNFTTFV DLSQKKEVAD
LVAKDLIRVN SYLPEGSRVK KFVLLHKEFD PDEAELTRTR KLRRGFVSER YKDLIDAMYH
LDKEVKVEAA VTYRDGRKGV VTTSIKVRSL
|
|---|
| |