Gene DET0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0938 
Symbol 
ID3229742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp858979 
End bp859791 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content46% 
IMG OID637120502 
Producthigh-affinity branched-chain amino acid ABC transporter, ATP-binding protein 
Protein accessionYP_181663 
Protein GI57234275 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0956002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGC CTGATACCAA GATAAAAATA GCTGACCTCT CCCTTTCGTT TGGCGGTATC 
AAAGCCCTGA AGGGAATCAA TCTGGACATA TATGATAATC AGATAACTGC CGTAATAGGT
CCGAATGGGG CAGGCAAGAC CAGTTTGCTA AACTGCATCA ACGGTTTTTA TAAACCCCAG
GCAGGCAGCA TTGTTTATAA AGGCCAGAAT ATTGCCCGTA TCCGCCCTGA CCGGGTGGCT
AAAATGGGTA TTGCCCGTAC TTTTCAGAAT ATAGAGCTTT ATTCAGGTTT GACTACCCTT
GAAAACCTGA TGGCCGCCCG GCATATATTT ATGAAACAGA ACTTTCTGAC CGGGGGTGCC
TATTTCGGGC CGGCCCATAA AGAAGAAATA GCTCACCGCA AGATAGTAGA AGACATAATA
GATTTTTTGG AAATAGAGCC TGTCCGCAAA AAGGTAGTCA GTATGCTGCC GTACGGCATG
CGTAAGCGGG TGGAACTGGG CCGGGCTTTG GCGCTTGAGC CGGAAGTACT TTTGCTGGAT
GAACCTATGG CAGGCATGAA TCTGGAAGAG AAAGAAGATA TTGCCCGCTT TATCGTAGAT
ATTTTTGAAG GGCAGGGTGA GACCTATCCT GATACTCCCA TACTGCGTGA CGGGGTAAAG
TGTATTGTGC TTATTGAACA CGATATGGGC GTAGTTATGG ATTTAGCTGA CCGTATTGCG
GTGCTGGACT TTGGCAGCAA AATAGCTGAG GGCAGGCCTG AAGAAATAAA GAATGATGAG
CACGTGATAG CGGCCTATCT GGGTGATGAA TAA
 
Protein sequence
MNQPDTKIKI ADLSLSFGGI KALKGINLDI YDNQITAVIG PNGAGKTSLL NCINGFYKPQ 
AGSIVYKGQN IARIRPDRVA KMGIARTFQN IELYSGLTTL ENLMAARHIF MKQNFLTGGA
YFGPAHKEEI AHRKIVEDII DFLEIEPVRK KVVSMLPYGM RKRVELGRAL ALEPEVLLLD
EPMAGMNLEE KEDIARFIVD IFEGQGETYP DTPILRDGVK CIVLIEHDMG VVMDLADRIA
VLDFGSKIAE GRPEEIKNDE HVIAAYLGDE