Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0938 |
Symbol | |
ID | 3229742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 858979 |
End bp | 859791 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637120502 |
Product | high-affinity branched-chain amino acid ABC transporter, ATP-binding protein |
Protein accession | YP_181663 |
Protein GI | 57234275 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0956002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAGC CTGATACCAA GATAAAAATA GCTGACCTCT CCCTTTCGTT TGGCGGTATC AAAGCCCTGA AGGGAATCAA TCTGGACATA TATGATAATC AGATAACTGC CGTAATAGGT CCGAATGGGG CAGGCAAGAC CAGTTTGCTA AACTGCATCA ACGGTTTTTA TAAACCCCAG GCAGGCAGCA TTGTTTATAA AGGCCAGAAT ATTGCCCGTA TCCGCCCTGA CCGGGTGGCT AAAATGGGTA TTGCCCGTAC TTTTCAGAAT ATAGAGCTTT ATTCAGGTTT GACTACCCTT GAAAACCTGA TGGCCGCCCG GCATATATTT ATGAAACAGA ACTTTCTGAC CGGGGGTGCC TATTTCGGGC CGGCCCATAA AGAAGAAATA GCTCACCGCA AGATAGTAGA AGACATAATA GATTTTTTGG AAATAGAGCC TGTCCGCAAA AAGGTAGTCA GTATGCTGCC GTACGGCATG CGTAAGCGGG TGGAACTGGG CCGGGCTTTG GCGCTTGAGC CGGAAGTACT TTTGCTGGAT GAACCTATGG CAGGCATGAA TCTGGAAGAG AAAGAAGATA TTGCCCGCTT TATCGTAGAT ATTTTTGAAG GGCAGGGTGA GACCTATCCT GATACTCCCA TACTGCGTGA CGGGGTAAAG TGTATTGTGC TTATTGAACA CGATATGGGC GTAGTTATGG ATTTAGCTGA CCGTATTGCG GTGCTGGACT TTGGCAGCAA AATAGCTGAG GGCAGGCCTG AAGAAATAAA GAATGATGAG CACGTGATAG CGGCCTATCT GGGTGATGAA TAA
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Protein sequence | MNQPDTKIKI ADLSLSFGGI KALKGINLDI YDNQITAVIG PNGAGKTSLL NCINGFYKPQ AGSIVYKGQN IARIRPDRVA KMGIARTFQN IELYSGLTTL ENLMAARHIF MKQNFLTGGA YFGPAHKEEI AHRKIVEDII DFLEIEPVRK KVVSMLPYGM RKRVELGRAL ALEPEVLLLD EPMAGMNLEE KEDIARFIVD IFEGQGETYP DTPILRDGVK CIVLIEHDMG VVMDLADRIA VLDFGSKIAE GRPEEIKNDE HVIAAYLGDE
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