Gene DET0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0935 
Symbolnth 
ID3229754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp856258 
End bp856914 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content46% 
IMG OID637120499 
Productendonuclease III 
Protein accessionYP_181660 
Protein GI57234287 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000351084 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTTG AGAATCCCAA AAAGCAGGCA TTAGAAATAA TTAAACGCCT TTCGGTGATA 
TACCCTGAGG CTAAAACAGC GCTTAACTTT ACTACCCCGT TTGAAATGCT GGTAGCTACT 
ATTTTGTCTG CCCAGTCTAC TGACAAAATG ATAAATAAAA TCACGCCAGC TCTCTTCAAA 
AAATATCCCG GCGTACAGGC CTTTGCTGAT GCATCTCTGG CTGAGTTGGA ACAGGATATT 
AAGTCATCAG GTTTCTTTCA CAACAAGGCG CTGAATATTA TAGGTGCTGC CAGAGCGGTT 
GTAAGCCGTT TTGGCGGGGA TGTCCCCCGT AATATGGCAG ATATGCTTAC TCTGCCGGGG 
GTTGGGCGTA AAACAGCCAA TGTAGTTTTG CATAATGCTT TCGGGCTGGT GGAGGGAATA 
GCGGTAGATA CCCATGTAAA GCGTTTAGCT GGGCGGCTGG GGCTAAGCAC TAATACTGAC 
CCGGTGAAAA TAGAGCAGGA TTTGATGGCA CTTATTCCCC GCAGTGAATG GGGGAATTTT 
TCGTATTACC TGATAGACCA TGGGCGCGCA GTCTGTGATG CCAAAAAGCC GCGTTGCCCG 
GAGTGTGTGC TTAATGATAT CTGCCCGTCT GCTTTTTTAT TTATCAAGGT GAAATAG
 
Protein sequence
MLVENPKKQA LEIIKRLSVI YPEAKTALNF TTPFEMLVAT ILSAQSTDKM INKITPALFK 
KYPGVQAFAD ASLAELEQDI KSSGFFHNKA LNIIGAARAV VSRFGGDVPR NMADMLTLPG 
VGRKTANVVL HNAFGLVEGI AVDTHVKRLA GRLGLSTNTD PVKIEQDLMA LIPRSEWGNF 
SYYLIDHGRA VCDAKKPRCP ECVLNDICPS AFLFIKVK