Gene DET0860 details

Gene Information

• Locus tag: DET0860
• ID: 3229828
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 787934
• End bp: 789880
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637120424
• Product: hydrogenase, EchA subunit, putative
• Protein accession: YP_181586
• Protein GI: 57234361
• COG category: [C] Energy production and conversion; [P] Inorganic ion transport and metabolism
• COG ID: [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCCAGTA GTCTTATTGC TATAGCCGTT CTCTTCCCAT TTACCGCCGG CTTGGTTTGC 
CTTTTTCTGA AAAATACCCT TCTCCGGTCC GGGCTGGTTG CTCTGTCAGC TATTGTACTC 
ATCTGCAGTT CCATTTTGCT GTTTTCCCAG GGAAATTTGC CCATTGAATA CAGCCCCGCC 
CACCAGTGGG ACAGTGTTAT TCTGGTGCTG GATTATGCTT TGCTGGTATT TTTCCTGTTT 
GTGGGTGTGA AAGATATCCT TAAAAACGGC TGGAGTGCCA GAGGTGTTTT AACCTCCGGG 
CTGGTGCTTT CCCAGATAAT TCTCCTGGGC CTGTTTGAGT TTGTCTGGGC ACCCTCCGTA 
CCGCTTGCGT CCGAACCGGC TTTCTTTATT GACCAGCTTT CGATAATAAT GTGCCTCATT 
ATTTCCATTA TCGGTTCGCT TATACTTCTT TACGCCATCA AATACATGAA AGACCATGAG 
CATCACCAGC ACCTAAGCGT CACCCGCCAG CCCCGTTTCT TCTTCTTTAT GACCATACTG 
CTGGGTGCTA TGAACGGCAT TGTCTTTTCT GATAACCTCC TCTGGATATA CTTTTTCTGG 
GAAATAACCA CTTTATGCTG CTTTGCCCTG ATTGGCCATG AACAAACCAA GGAAGCCATC 
AACAATGCTT TTAGGGCTTT GTGGATGAAT CTGATAGGCG GTCTGGGATT TGTACTGGCT 
ATTATTTATG TCTTTACAAA TTATGACAGT ATTTCCCTGC AGGCTCTTAT AACTAACCCG 
GCCGTAGCCA TGGCGCCACT CTTCTTCCTG TTTATGGCGG CTTTTACCAA ATCAGCCCAG 
GTGCCGTTTC AGGGCTGGCT TCTGGGGGCA ATGGTGGCAC CCGTACCTGT TTCCGCCCTG 
CTTCATTCCT CCACTATGGT AAAAGCGGGT ATTTACCTTT CTATCCGGCT GGCACCGGCT 
ATTACTGATA CATCTTTAGC TACGTTAATT GCCCTGTTCG GGGCATTTAC TTTTATGGTT 
ACCGCCATTA TGGCCATCAG CCAGCGTGAA TCCAAGAAAG TTTTAGCCTA CTCCACCATC 
TCAAACCTGG GGCTTATTAT TATGTGTGTG GGTATAAATA CCCCTTTGGC AATTACTGCT 
GCCATTGTGC TCACCATTTT TCATGCCATA TCAAAAGCCT TGCTCTTTAT GTGCGTGGGT 
GTCATAGACC ACTCTTTGGG CAGCCGTGAT ATTGAAAACA TGGAGGGGCT GGTACGCCGT 
TACCCTTTAA TTGCCGGTAT AACTATAGCC GGTATTCTCT CCATGATGCT GGTGCCTTTC 
GGTATGCTGC TGGGCAAATG GGCGGCTATA GAGGCCACTT CAGCTATGTC CGGGTTTATC 
TCACCCCTGG TGTTCCTGCT GCTGATTATA GGCTCGGCAG CTACTACCGT TTTCTGGGTA 
AAATGGCTGG GCCGCTTTTT CAGCGTAACG CCGGGTATAG AAAAAATACG TTTTGAGCGT 
TTTTCATTTT TATACCACGC CCCTTTGATT GTACTGCTGG CTTTTGCCGG AGTGTTCAGT 
ATAGGGGTGA TACCCTTCTA TGAAAGCTTT ATTTTACCGG CGGTAACTGC TTTCTATCCG 
AATGCCATTG ACACTTCAAA CGGATTTTTC GGCAGTGCGG CCGGGTTATT TACTGTGTGG 
CCGCTGTTTA TCCTGCTGGC CATAGCCATT ATACTGGTGC CGGTTTTATT TAAGCCTAAA 
ACCAAAAACC TCAGCACTGC CTATATGTGC GGTGAAAATG TCAGCACCTC AGCGGACAGT 
TTTTATTCGG TGGCTGACGG TGAAACTAAA CTAAAGCTGG GGTCTATGTA TCTTGACACC 
CAGTTTGCCA ACCCCCATCT GGATACCGGG CTAAAAATAG CTGGCCTTTT GATACTGGTT 
AGTATGCTGG TAGTGGTGCT GATATGA 

 

Protein sequence

MASSLIAIAV LFPFTAGLVC LFLKNTLLRS GLVALSAIVL ICSSILLFSQ GNLPIEYSPA 
HQWDSVILVL DYALLVFFLF VGVKDILKNG WSARGVLTSG LVLSQIILLG LFEFVWAPSV 
PLASEPAFFI DQLSIIMCLI ISIIGSLILL YAIKYMKDHE HHQHLSVTRQ PRFFFFMTIL 
LGAMNGIVFS DNLLWIYFFW EITTLCCFAL IGHEQTKEAI NNAFRALWMN LIGGLGFVLA 
IIYVFTNYDS ISLQALITNP AVAMAPLFFL FMAAFTKSAQ VPFQGWLLGA MVAPVPVSAL 
LHSSTMVKAG IYLSIRLAPA ITDTSLATLI ALFGAFTFMV TAIMAISQRE SKKVLAYSTI 
SNLGLIIMCV GINTPLAITA AIVLTIFHAI SKALLFMCVG VIDHSLGSRD IENMEGLVRR 
YPLIAGITIA GILSMMLVPF GMLLGKWAAI EATSAMSGFI SPLVFLLLII GSAATTVFWV 
KWLGRFFSVT PGIEKIRFER FSFLYHAPLI VLLAFAGVFS IGVIPFYESF ILPAVTAFYP 
NAIDTSNGFF GSAAGLFTVW PLFILLAIAI ILVPVLFKPK TKNLSTAYMC GENVSTSADS 
FYSVADGETK LKLGSMYLDT QFANPHLDTG LKIAGLLILV SMLVVVLI