| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0825 |
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| Symbol | |
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| ID | 3229902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 752778 |
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| End bp | 754379 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637120389 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_181552 |
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| Protein GI | 57234435 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAGTAA AACTATATGA TACTACTTTA AGAGACGGTT CTCAGCGTGA AGGAATTTCC
TTTACGGTAG CTGATAAGCT TAAGATTGCC CAGAAACTGG ATGAACTGGG CATACACTAT
ATTGAGGGCG GCTGGCCGGG TTCAAACCCC AAAGACAGTG AATTTTTTGT TCAGGTAAAG
TCCCTCAAGC TGAAAAATGC CAAAATGGTG GCTTTCGGCT CTACCCGCCG CCCCAAAGTT
AAAGCCGAAG CAGATGCAAC CCTGAAGCAG CTGGTTGAGG CAGGTACGGA ATATGTTACA
TTGGTCGGCA AGAGTTCCGC CAGACAGGTG ACCCAGGTGC TGGAAACCAC TCTGGAAGAA
AATCTGGCCA TGATTACTGA TTCCATTGAA TACCTGCGTT CAAAATGCAT AAAGGTTTTT
TTGGACGCCG AACACTTTTT TGACGGCTAC AAAGACAACC CCGAATACTC CATACAGGTT
TTGCAGGCGG CCGAAAAGGC CGGAGCTGAA GGCGTGGTGC TTTGCGATAC CAACGGAGGC
AGTCTGCCCG AAGAAATAGC CGAAGCCGTA GAAGCGGTAA CCAAGTCGGT AAATATCTGC
GTGGGTATTC ACTCTCATAA TGACACGGAA ATGGCCGTAG CTAACAGTAT AGCCGCTCTC
AAGGCCGGTG CCAGCCAGAT TCAGGGTACG ATAAATGGTT TTGGTGAAAG ATGCGGCAAT
GCCAACATGT GCTCCATAAT ACCCATTTTA AAGCTGAAAA TGGGTATAGA CTGCATAACT
GACAGCCAGT TGAAGCTGCT GACCGATACT TCCCATTATA TAAGCGAACT GGCAAATCTG
GTTTCCGAAC CGTTTTTGCC GTATGTGGGT GCCAGCGCCT TTTCCCACAA AGCAGGCCTG
CATGTCAGCG GCCTGAGCAA GTGGTCAGGC AGTTACCAGC ATATAGAGCC GGAACTGGTG
GGCAACCGCC AGCGTTTATT GGTATCGGAA TTGGCAGGCC GGTCAAACAT TGTCCAAAGG
GCCAAAGCTA TCGGCATAAA TTTGACGTCG GACTCAAAAG AAGTCAAAGA TTTGCTTCAG
CAGGTCAAGA AAATGGAGAG CATGGGTTTT CAGTATGAAA ATGCTGAGGC CTCTTTTGAT
TTGCTGGTAA ACCGCACCCA GGCGGGTTAT GCAGCCCCGT TTGAGCTTAT AGATTTTATG
GTGGTGGTAG AAAAACAGCG CCGCCCCTCA GCTATGCGCA GCCAGGACGA AATGATGGCC
GAAGGGATAG TAAAAGTAAG GGTAGACGGC GAGGTTATGC ATACTGTCGC CGAAGGCAAC
GGCCCCATAA ATGCACTTGA TGCCGCTTTG CGCAAAGGAC TTTGCCAGTT TTATCCGGAA
CTTTCATCTG TCCATCTTTC GGATTACAAG GTGCGTATAC TGGAGCAGAC CAGCGGTACA
GATGCTTTGG TGAGGGTGCT GATTGAATCT ACTGATGGTG AAAGTACCTG GCATACTGTA
GGTGCCAGCC CGAATATCAT CGAAGCCAGT TGGCTGGCTT TGTCAGACAG CTTTGAATAC
TGGCTGATTA CCAAGAAATG TAAAAACTGC AAGAAACAGT AA
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| Protein sequence | MQVKLYDTTL RDGSQREGIS FTVADKLKIA QKLDELGIHY IEGGWPGSNP KDSEFFVQVK
SLKLKNAKMV AFGSTRRPKV KAEADATLKQ LVEAGTEYVT LVGKSSARQV TQVLETTLEE
NLAMITDSIE YLRSKCIKVF LDAEHFFDGY KDNPEYSIQV LQAAEKAGAE GVVLCDTNGG
SLPEEIAEAV EAVTKSVNIC VGIHSHNDTE MAVANSIAAL KAGASQIQGT INGFGERCGN
ANMCSIIPIL KLKMGIDCIT DSQLKLLTDT SHYISELANL VSEPFLPYVG ASAFSHKAGL
HVSGLSKWSG SYQHIEPELV GNRQRLLVSE LAGRSNIVQR AKAIGINLTS DSKEVKDLLQ
QVKKMESMGF QYENAEASFD LLVNRTQAGY AAPFELIDFM VVVEKQRRPS AMRSQDEMMA
EGIVKVRVDG EVMHTVAEGN GPINALDAAL RKGLCQFYPE LSSVHLSDYK VRILEQTSGT
DALVRVLIES TDGESTWHTV GASPNIIEAS WLALSDSFEY WLITKKCKNC KKQ
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