Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0814 |
Symbol | |
ID | 3229920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 744263 |
End bp | 744988 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637120378 |
Product | ABC transporter, permease protein |
Protein accession | YP_181542 |
Protein GI | 57234453 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAATA TACTGGCTAT TGCCCAGAGG CTTATCCGCC AGTTGCTCCA TGACCGGCGG ACTATGGCCC TTATTATAGT AGTCCCGGTG GTGGTTATGG GGCTTATAGG GGTAAGTTTC CCGGATGCCA CTGTACTTGA TTATATTGCC CCGGCCATGC TGGCCACTTT AGCCCTGTTT TTCAGCTTCC TGCTGACCGG CATTTCATTC CTTAGGGAGA CATCTCAGGG GACTATGGAA AGGCTTATGG CGGCACCTGT TTCCCGTCTG GACATAGTTG CCGGTTATCT GCTGGGGTTT TTCGTGTTTG CCCTGCTCCA GACACTTATC ATTGTTCTTT TTACTATCTA CGTGCTGGGA GTCAACTTTC AGGGTGAACT CTGGCAGATT CTGCTCTTTC AGGTGCTTAT TATTACCGGG GCGGTTACAC TGGGCATTTT CACCAGCAGT TTTGCCAAAA ATGAATTTCA AATGGTTCAG TTTATCCCTC TTATTATTGT CCCCCAGGTG TTTTTGTGCG GTGTTATCTG GCCGGTTTCC CAAATGCCGG AATGGCTTCA GTACCTGTCA AATATACTGC CGCTGACCTA TGGCGTGGAC GGCATGCGGG AAATAATGCT TCAGGGGAAA AATCTGGCTG AAGTAGGCTT TCAGTGCGGG GTTCTGATAT TGTTTGCAGT TATTACCACC GCTTTGGCGG CACTCACCGT TCCCAAGCGC CGCTAA
|
Protein sequence | MNNILAIAQR LIRQLLHDRR TMALIIVVPV VVMGLIGVSF PDATVLDYIA PAMLATLALF FSFLLTGISF LRETSQGTME RLMAAPVSRL DIVAGYLLGF FVFALLQTLI IVLFTIYVLG VNFQGELWQI LLFQVLIITG AVTLGIFTSS FAKNEFQMVQ FIPLIIVPQV FLCGVIWPVS QMPEWLQYLS NILPLTYGVD GMREIMLQGK NLAEVGFQCG VLILFAVITT ALAALTVPKR R
|
| |