Gene DET0814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0814 
Symbol 
ID3229920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp744263 
End bp744988 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content49% 
IMG OID637120378 
ProductABC transporter, permease protein 
Protein accessionYP_181542 
Protein GI57234453 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATA TACTGGCTAT TGCCCAGAGG CTTATCCGCC AGTTGCTCCA TGACCGGCGG 
ACTATGGCCC TTATTATAGT AGTCCCGGTG GTGGTTATGG GGCTTATAGG GGTAAGTTTC
CCGGATGCCA CTGTACTTGA TTATATTGCC CCGGCCATGC TGGCCACTTT AGCCCTGTTT
TTCAGCTTCC TGCTGACCGG CATTTCATTC CTTAGGGAGA CATCTCAGGG GACTATGGAA
AGGCTTATGG CGGCACCTGT TTCCCGTCTG GACATAGTTG CCGGTTATCT GCTGGGGTTT
TTCGTGTTTG CCCTGCTCCA GACACTTATC ATTGTTCTTT TTACTATCTA CGTGCTGGGA
GTCAACTTTC AGGGTGAACT CTGGCAGATT CTGCTCTTTC AGGTGCTTAT TATTACCGGG
GCGGTTACAC TGGGCATTTT CACCAGCAGT TTTGCCAAAA ATGAATTTCA AATGGTTCAG
TTTATCCCTC TTATTATTGT CCCCCAGGTG TTTTTGTGCG GTGTTATCTG GCCGGTTTCC
CAAATGCCGG AATGGCTTCA GTACCTGTCA AATATACTGC CGCTGACCTA TGGCGTGGAC
GGCATGCGGG AAATAATGCT TCAGGGGAAA AATCTGGCTG AAGTAGGCTT TCAGTGCGGG
GTTCTGATAT TGTTTGCAGT TATTACCACC GCTTTGGCGG CACTCACCGT TCCCAAGCGC
CGCTAA
 
Protein sequence
MNNILAIAQR LIRQLLHDRR TMALIIVVPV VVMGLIGVSF PDATVLDYIA PAMLATLALF 
FSFLLTGISF LRETSQGTME RLMAAPVSRL DIVAGYLLGF FVFALLQTLI IVLFTIYVLG
VNFQGELWQI LLFQVLIITG AVTLGIFTSS FAKNEFQMVQ FIPLIIVPQV FLCGVIWPVS
QMPEWLQYLS NILPLTYGVD GMREIMLQGK NLAEVGFQCG VLILFAVITT ALAALTVPKR
R