| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0802 |
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| Symbol | panD |
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| ID | 3229847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 737060 |
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| End bp | 737434 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637120366 |
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| Product | aspartate alpha-decarboxylase |
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| Protein accession | YP_181534 |
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| Protein GI | 57234380 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0853] Aspartate 1-decarboxylase |
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| TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000217258 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTCAAAA GCAAAATCCA CCGGGCTACC ATTACCGATG CCTGCATAGA CTATGAAGGC
AGTATTACCA TTGATAAAAA CCTTATGCAG GCAGCCAACT TGCTGCCCTA CGAACAGGTG
CATGTGGTAA ATGTAAATAA CGGAACGCGG CTGGAGACCT ATGTCATAGA GGGCCCGGCT
GGCAGCGGGC AGATATGCTT AAACGGGGCA GCTGCCCGTA TGGGAATGAA GGGTGATAAA
GTAATTATAC TGGGCTACAG TCTGATTACC GAAGAAGATA CCCTTACCCA CCAGCCGAAT
CTGGTCTATG TAGACAGTCT TAACCGCATA ACCAAAGTTA AAAACGGGGT TGCCAGCCGG
AATTTAGAGG TATAA
|
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| Protein sequence | MLKSKIHRAT ITDACIDYEG SITIDKNLMQ AANLLPYEQV HVVNVNNGTR LETYVIEGPA
GSGQICLNGA AARMGMKGDK VIILGYSLIT EEDTLTHQPN LVYVDSLNRI TKVKNGVASR
NLEV
|
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