| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0789 |
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| Symbol | |
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| ID | 3229868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 726474 |
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| End bp | 727223 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637120353 |
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| Product | RsuA family pseudouridine synthase |
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| Protein accession | YP_181521 |
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| Protein GI | 57234401 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.767423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCATATA ATGCATCTTC AGGTACTCCG TTGGTGAAAG TTTTAGTGGA AGCCAGGCTT
GGTTCACGCC GCAAAATGGC GGAGGCTATT AAGCAAGGTC TGGTTACTTT GAACGGACAG
AAAGCGGAAT CTTACTCCCA GCCGGTAAAT ACCCAGCAGG ACAAGGTAAC CTTTGAGGGC
AAACCTGTTG AACTTAGCCG TATCCGCCGT ATATACCTTA TGTTAAATAA GCCGCCTGAA
ATAGTCTCTA CCACCAGTGA TGAACTGGGT CGTAAAACTG TGATGGATTT GCTCCACCGC
CGTTATGAGG GGGCAGGTCT TTTCCCGGTG GGCAGGCTGG ACGAGACTAC TACCGGCCTT
TTGTTGCTTA CCAATGACGG TGAACTGACT AACCGCCTTA CCCACCCCAG CTATGAAATA
GAAAAAGAAT ACCTGATATC CATTGATGCC GCACTTACCC AGGCAGATAA AGAAAGCCTG
GAAAAAGGCA TGCTGCTGGA TGACGGGCTG ACCTCACCTG CCCGCTTAAG CCGGGTTACA
GACGAACCGC CGTATAACTA CAAACTGATA ATACACGAAG GTAAAAAAAG GATAGTAAGG
CGTATGTTTG CCCATTTGGG ATACCAGATA AAGGCTTTGA AGCGCAGCCG TATAGCCACA
CTGCGTTTGG GCAAACTGGA AGAGGGTAAA ACCCGTGAGC TTACTCCGGG AGAGATAGCC
GCCCTAAAGC GTATTACCCG CCTTAAATAA
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| Protein sequence | MSYNASSGTP LVKVLVEARL GSRRKMAEAI KQGLVTLNGQ KAESYSQPVN TQQDKVTFEG
KPVELSRIRR IYLMLNKPPE IVSTTSDELG RKTVMDLLHR RYEGAGLFPV GRLDETTTGL
LLLTNDGELT NRLTHPSYEI EKEYLISIDA ALTQADKESL EKGMLLDDGL TSPARLSRVT
DEPPYNYKLI IHEGKKRIVR RMFAHLGYQI KALKRSRIAT LRLGKLEEGK TRELTPGEIA
ALKRITRLK
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