Gene DET0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0780 
SymbolrnhB 
ID3229884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand+ 
Start bp717797 
End bp718432 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content54% 
IMG OID637120344 
Productribonuclease HII 
Protein accessionYP_181512 
Protein GI57234417 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCCG CGATCTGCCC CGGCTGGGCT GAGGAAAAGC ATCTCTGGAA GCAGGGTTTT 
TCCTCAATTG CCGGTTTAGA CGAAGCCGGC AGGGGGTGTC TGGCCGGACC GGTGGTAGCC 
GGAGCGGTCA TCATGCCGCC CCGGTTAAAG GGCGACTGGG TGGCTATGGT GCGGGACAGC 
AAGGTGCTTA CCCCCGAAAA ACGCGAATAC CTTTACTGCC ATATTGTTTC CATGGCAATA 
AGTTTCGGGG TGGGTGTAGT GGATAATACC CAGATTGATT GCCTGGGGAT TGCCCCTGCT 
ACCAGGCTTG CCATGAAGCA GGCGGTGGAA CATTTGGATT GTCGGCCTGA TTTTTTGCTG 
GTGGATTACC TGAAACTGCC GGATATTCCC CTGCCCCAAA AGGGCATTGT GGATGGTGAT 
GCCCTTTGCT TCAGTATTGC CTGTGCTTCC ATTATTGCCA AGGTCAGCCG TGACCGGCTG 
ATGTGCGAAC TTGAGGCTAC CTATCCCGGA TACCACCTTG CCAAGCACAA GGGGTATGGC 
ACGGCGCTTC ATATGGAGTG CATTTCCCAA AAAGGTATCT CCCCCATCCA CCGCCGCACT 
TTTGCCCCTT TAAAGAGTAT GTTTGATGTC ATATAA
 
Protein sequence
MPAAICPGWA EEKHLWKQGF SSIAGLDEAG RGCLAGPVVA GAVIMPPRLK GDWVAMVRDS 
KVLTPEKREY LYCHIVSMAI SFGVGVVDNT QIDCLGIAPA TRLAMKQAVE HLDCRPDFLL 
VDYLKLPDIP LPQKGIVDGD ALCFSIACAS IIAKVSRDRL MCELEATYPG YHLAKHKGYG 
TALHMECISQ KGISPIHRRT FAPLKSMFDV I